These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

207 related articles for article (PubMed ID: 24460695)

  • 21. gpps: an ILP-based approach for inferring cancer progression with mutation losses from single cell data.
    Ciccolella S; Soto Gomez M; Patterson MD; Della Vedova G; Hajirasouliha I; Bonizzoni P
    BMC Bioinformatics; 2020 Dec; 21(Suppl 1):413. PubMed ID: 33297943
    [TBL] [Abstract][Full Text] [Related]  

  • 22. ddClone: joint statistical inference of clonal populations from single cell and bulk tumour sequencing data.
    Salehi S; Steif A; Roth A; Aparicio S; Bouchard-Côté A; Shah SP
    Genome Biol; 2017 Mar; 18(1):44. PubMed ID: 28249593
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Population genomic analysis of model and nonmodel organisms using sequenced RAD tags.
    Hohenlohe PA; Catchen J; Cresko WA
    Methods Mol Biol; 2012; 888():235-60. PubMed ID: 22665285
    [TBL] [Abstract][Full Text] [Related]  

  • 24. ClinQC: a tool for quality control and cleaning of Sanger and NGS data in clinical research.
    Pandey RV; Pabinger S; Kriegner A; Weinhäusel A
    BMC Bioinformatics; 2016 Feb; 17():56. PubMed ID: 26830926
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Inferring the Evolution and Progression of Small-Cell Lung Cancer by Single-Cell Sequencing of Circulating Tumor Cells.
    Su Z; Wang Z; Ni X; Duan J; Gao Y; Zhuo M; Li R; Zhao J; Ma Q; Bai H; Chen H; Wang S; Chen X; An T; Wang Y; Tian Y; Yu J; Wang D; Xie XS; Bai F; Wang J
    Clin Cancer Res; 2019 Aug; 25(16):5049-5060. PubMed ID: 31113842
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Assessing intratumor heterogeneity and tracking longitudinal and spatial clonal evolutionary history by next-generation sequencing.
    Jiang Y; Qiu Y; Minn AJ; Zhang NR
    Proc Natl Acad Sci U S A; 2016 Sep; 113(37):E5528-37. PubMed ID: 27573852
    [TBL] [Abstract][Full Text] [Related]  

  • 27. CLImAT-HET: detecting subclonal copy number alterations and loss of heterozygosity in heterogeneous tumor samples from whole-genome sequencing data.
    Yu Z; Li A; Wang M
    BMC Med Genomics; 2017 Mar; 10(1):15. PubMed ID: 28298214
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Advances in understanding tumour evolution through single-cell sequencing.
    Kuipers J; Jahn K; Beerenwinkel N
    Biochim Biophys Acta Rev Cancer; 2017 Apr; 1867(2):127-138. PubMed ID: 28193548
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Inference of mutability landscapes of tumors from single cell sequencing data.
    Tsyvina V; Zelikovsky A; Snir S; Skums P
    PLoS Comput Biol; 2020 Nov; 16(11):e1008454. PubMed ID: 33253159
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Tumor Copy Number Deconvolution Integrating Bulk and Single-Cell Sequencing Data.
    Lei H; Lyu B; Gertz EM; Schäffer AA; Shi X; Wu K; Li G; Xu L; Hou Y; Dean M; Schwartz R
    J Comput Biol; 2020 Apr; 27(4):565-598. PubMed ID: 32181683
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Whole-genome amplification of single-cell genomes for next-generation sequencing.
    Korfhage C; Fisch E; Fricke E; Baedker S; Loeffert D
    Curr Protoc Mol Biol; 2013 Oct; 104():7.14.1-7.14.11. PubMed ID: 24510298
    [TBL] [Abstract][Full Text] [Related]  

  • 32. BAMSE: Bayesian model selection for tumor phylogeny inference among multiple samples.
    Toosi H; Moeini A; Hajirasouliha I
    BMC Bioinformatics; 2019 Jun; 20(Suppl 11):282. PubMed ID: 31167637
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Joint inference of cell lineage and mitochondrial evolution from single-cell sequencing data.
    Sashittal P; Chen V; Pasarkar A; Raphael BJ
    Bioinformatics; 2024 Jun; 40(Supplement_1):i218-i227. PubMed ID: 38940122
    [TBL] [Abstract][Full Text] [Related]  

  • 34. LoRA-TV: read depth profile-based clustering of tumor cells in single-cell sequencing.
    Duan J; Zhao X; Wu X
    Brief Bioinform; 2024 May; 25(4):. PubMed ID: 38877886
    [TBL] [Abstract][Full Text] [Related]  

  • 35. The evolutionary history of Xiphophorus fish and their sexually selected sword: a genome-wide approach using restriction site-associated DNA sequencing.
    Jones JC; Fan S; Franchini P; Schartl M; Meyer A
    Mol Ecol; 2013 Jun; 22(11):2986-3001. PubMed ID: 23551333
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Development and validation of a scalable next-generation sequencing system for assessing relevant somatic variants in solid tumors.
    Hovelson DH; McDaniel AS; Cani AK; Johnson B; Rhodes K; Williams PD; Bandla S; Bien G; Choppa P; Hyland F; Gottimukkala R; Liu G; Manivannan M; Schageman J; Ballesteros-Villagrana E; Grasso CS; Quist MJ; Yadati V; Amin A; Siddiqui J; Betz BL; Knudsen KE; Cooney KA; Feng FY; Roh MH; Nelson PS; Liu CJ; Beer DG; Wyngaard P; Chinnaiyan AM; Sadis S; Rhodes DR; Tomlins SA
    Neoplasia; 2015 Apr; 17(4):385-99. PubMed ID: 25925381
    [TBL] [Abstract][Full Text] [Related]  

  • 37. A comparison of single-cell trajectory inference methods.
    Saelens W; Cannoodt R; Todorov H; Saeys Y
    Nat Biotechnol; 2019 May; 37(5):547-554. PubMed ID: 30936559
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Molecular diagnostic characteristics based on the next generation sequencing in lung cancer and its relationship with the expression of PD-L1.
    Liu J; Liu Y
    Pathol Res Pract; 2020 Feb; 216(2):152797. PubMed ID: 31926773
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Parameter, noise, and tree topology effects in tumor phylogeny inference.
    Tomlinson K; Oesper L
    BMC Med Genomics; 2019 Dec; 12(Suppl 10):184. PubMed ID: 31865909
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Annotation of Variant Data from High-Throughput DNA Sequencing from Tumor Specimens: Filtering Strategies to Identify Driver Mutations.
    Sun S; Thorson JA; Murray SS
    Methods Mol Biol; 2019; 1908():49-60. PubMed ID: 30649720
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 11.