These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

191 related articles for article (PubMed ID: 24467754)

  • 1. ODEion--a software module for structural identification of ordinary differential equations.
    Gennemark P; Wedelin D
    J Bioinform Comput Biol; 2014 Feb; 12(1):1350015. PubMed ID: 24467754
    [TBL] [Abstract][Full Text] [Related]  

  • 2. CRA toolbox: software package for conditional robustness analysis of cancer systems biology models in MATLAB.
    Bianconi F; Antonini C; Tomassoni L; Valigi P
    BMC Bioinformatics; 2019 Jul; 20(1):385. PubMed ID: 31288758
    [TBL] [Abstract][Full Text] [Related]  

  • 3. GenSSI 2.0: multi-experiment structural identifiability analysis of SBML models.
    Ligon TS; Fröhlich F; Chis OT; Banga JR; Balsa-Canto E; Hasenauer J
    Bioinformatics; 2018 Apr; 34(8):1421-1423. PubMed ID: 29206901
    [TBL] [Abstract][Full Text] [Related]  

  • 4. SBML-PET: a Systems Biology Markup Language-based parameter estimation tool.
    Zi Z; Klipp E
    Bioinformatics; 2006 Nov; 22(21):2704-5. PubMed ID: 16926221
    [TBL] [Abstract][Full Text] [Related]  

  • 5. PLMaddon: a power-law module for the Matlab SBToolbox.
    Vera J; Sun C; Oertel Y; Wolkenhauer O
    Bioinformatics; 2007 Oct; 23(19):2638-40. PubMed ID: 17495997
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Robust optimal design of experiments for model discrimination using an interactive software tool.
    Stegmaier J; Skanda D; Lebiedz D
    PLoS One; 2013; 8(2):e55723. PubMed ID: 23390549
    [TBL] [Abstract][Full Text] [Related]  

  • 7. BioBayes: a software package for Bayesian inference in systems biology.
    Vyshemirsky V; Girolami M
    Bioinformatics; 2008 Sep; 24(17):1933-4. PubMed ID: 18632751
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Data2Dynamics: a modeling environment tailored to parameter estimation in dynamical systems.
    Raue A; Steiert B; Schelker M; Kreutz C; Maiwald T; Hass H; Vanlier J; Tönsing C; Adlung L; Engesser R; Mader W; Heinemann T; Hasenauer J; Schilling M; Höfer T; Klipp E; Theis F; Klingmüller U; Schöberl B; Timmer J
    Bioinformatics; 2015 Nov; 31(21):3558-60. PubMed ID: 26142188
    [TBL] [Abstract][Full Text] [Related]  

  • 9. SBML-PET-MPI: a parallel parameter estimation tool for Systems Biology Markup Language based models.
    Zi Z
    Bioinformatics; 2011 Apr; 27(7):1028-9. PubMed ID: 21303862
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Benchmarks for identification of ordinary differential equations from time series data.
    Gennemark P; Wedelin D
    Bioinformatics; 2009 Mar; 25(6):780-6. PubMed ID: 19176548
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Computational modeling of biochemical networks using COPASI.
    Mendes P; Hoops S; Sahle S; Gauges R; Dada J; Kummer U
    Methods Mol Biol; 2009; 500():17-59. PubMed ID: 19399433
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Dynamic sensitivity analysis of biological systems.
    Wu WH; Wang FS; Chang MS
    BMC Bioinformatics; 2008 Dec; 9 Suppl 12(Suppl 12):S17. PubMed ID: 19091016
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A specialized ODE integrator for the efficient computation of parameter sensitivities.
    Gonnet P; Dimopoulos S; Widmer L; Stelling J
    BMC Syst Biol; 2012 May; 6():46. PubMed ID: 22607742
    [TBL] [Abstract][Full Text] [Related]  

  • 14. MathSBML: a package for manipulating SBML-based biological models.
    Shapiro BE; Hucka M; Finney A; Doyle J
    Bioinformatics; 2004 Nov; 20(16):2829-31. PubMed ID: 15087311
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Bifurcation discovery tool.
    Chickarmane V; Paladugu SR; Bergmann F; Sauro HM
    Bioinformatics; 2005 Sep; 21(18):3688-90. PubMed ID: 16081475
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A Step-by-Step Guide to Using BioNetFit.
    Hlavacek WS; Csicsery-Ronay JA; Baker LR; Ramos Álamo MDC; Ionkov A; Mitra ED; Suderman R; Erickson KE; Dias R; Colvin J; Thomas BR; Posner RG
    Methods Mol Biol; 2019; 1945():391-419. PubMed ID: 30945257
    [TBL] [Abstract][Full Text] [Related]  

  • 17. An improved constraint filtering technique for inferring hidden states and parameters of a biological model.
    Murtuza Baker S; Poskar CH; Schreiber F; Junker BH
    Bioinformatics; 2013 Apr; 29(8):1052-9. PubMed ID: 23434837
    [TBL] [Abstract][Full Text] [Related]  

  • 18. An Automated Biomodel Selection System (BMSS) for Gene Circuit Designs.
    Yeoh JW; Ng KBI; Teh AY; Zhang J; Chee WKD; Poh CL
    ACS Synth Biol; 2019 Jul; 8(7):1484-1497. PubMed ID: 31035759
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Differential simulated annealing: a robust and efficient global optimization algorithm for parameter estimation of biological networks.
    Dai Z; Lai L
    Mol Biosyst; 2014 Jun; 10(6):1385-92. PubMed ID: 24714701
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A perturbation-based estimate algorithm for parameters of coupled ordinary differential equations, applications from chemical reactions to metabolic dynamics.
    Shiang KD
    Comput Methods Programs Biomed; 2009 May; 94(2):118-42. PubMed ID: 19157629
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.