These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

189 related articles for article (PubMed ID: 24478781)

  • 21. Mesoscale model of polymer melt structure: self-consistent mapping of molecular correlations to coarse-grained potentials.
    Ashbaugh HS; Patel HA; Kumar SK; Garde S
    J Chem Phys; 2005 Mar; 122(10):104908. PubMed ID: 15836359
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Protein-Protein Docking with Large-Scale Backbone Flexibility Using Coarse-Grained Monte-Carlo Simulations.
    Kurcinski M; Kmiecik S; Zalewski M; Kolinski A
    Int J Mol Sci; 2021 Jul; 22(14):. PubMed ID: 34298961
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Coarse-grained Monte Carlo simulations of non-equilibrium systems.
    Liu X; Crocker JC; Sinno T
    J Chem Phys; 2013 Jun; 138(24):244111. PubMed ID: 23822231
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Adaptive coarse-grained Monte Carlo simulation of reaction and diffusion dynamics in heterogeneous plasma membranes.
    Collins S; Stamatakis M; Vlachos DG
    BMC Bioinformatics; 2010 Apr; 11():218. PubMed ID: 20429923
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Modeling of Protein Structural Flexibility and Large-Scale Dynamics: Coarse-Grained Simulations and Elastic Network Models.
    Kmiecik S; Kouza M; Badaczewska-Dawid AE; Kloczkowski A; Kolinski A
    Int J Mol Sci; 2018 Nov; 19(11):. PubMed ID: 30404229
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Coarse-Grained Models of RNA Nanotubes for Large Time Scale Studies in Biomedical Applications.
    Badu S; Prabhakar S; Melnik R
    Biomedicines; 2020 Jul; 8(7):. PubMed ID: 32640509
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Coarse-grained representation of protein flexibility. Foundations, successes, and shortcomings.
    Orozco M; Orellana L; Hospital A; Naganathan AN; Emperador A; Carrillo O; Gelpí JL
    Adv Protein Chem Struct Biol; 2011; 85():183-215. PubMed ID: 21920324
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Coarse-grained modeling of RNA 3D structure.
    Dawson WK; Maciejczyk M; Jankowska EJ; Bujnicki JM
    Methods; 2016 Jul; 103():138-56. PubMed ID: 27125734
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Using a Coarse-Grained Modeling Framework to Identify Oligomeric Motifs with Tunable Secondary Structure.
    Walker CC; Meek GA; Fobe TL; Shirts MR
    J Chem Theory Comput; 2021 Oct; 17(10):6018-6035. PubMed ID: 34495659
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Coarse-grained model for phospholipid/cholesterol bilayer.
    Murtola T; Falck E; Patra M; Karttunen M; Vattulainen I
    J Chem Phys; 2004 Nov; 121(18):9156-65. PubMed ID: 15527384
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Prediction of membrane separation efficiency for hydrophobic and hydrophilic proteins : A coarse-grained Brownian dynamics simulation study.
    Zhang Y; Zhang Y; McCready MJ; Maginn EJ
    J Mol Model; 2019 Apr; 25(5):132. PubMed ID: 31025120
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Equation of motion for coarse-grained simulation based on microscopic description.
    Kinjo T; Hyodo SA
    Phys Rev E Stat Nonlin Soft Matter Phys; 2007 May; 75(5 Pt 1):051109. PubMed ID: 17677024
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Coarse-grained computations for a micellar system.
    Kopelevich DI; Panagiotopoulos AZ; Kevrekidis IG
    J Chem Phys; 2005 Jan; 122(4):44907. PubMed ID: 15740298
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Interactions of lipid bilayers with supports: a coarse-grained molecular simulation study.
    Xing C; Faller R
    J Phys Chem B; 2008 Jun; 112(23):7086-94. PubMed ID: 18461982
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Configurational-Bias Monte Carlo Back-Mapping Algorithm for Efficient and Rapid Conversion of Coarse-Grained Water Structures into Atomistic Models.
    Loeffler TD; Chan H; Narayanan B; Cherukara MJ; Gray S; Sankaranarayanan SKRS
    J Phys Chem B; 2018 Jul; 122(28):7102-7110. PubMed ID: 29923722
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Computer simulations of protein-membrane systems.
    Loschwitz J; Olubiyi OO; Hub JS; Strodel B; Poojari CS
    Prog Mol Biol Transl Sci; 2020; 170():273-403. PubMed ID: 32145948
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Coarse-grained lattice kinetic Monte Carlo simulation of systems of strongly interacting particles.
    Dai J; Seider WD; Sinno T
    J Chem Phys; 2008 May; 128(19):194705. PubMed ID: 18500884
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Development of a coarse-grained α-chitin model on the basis of MARTINI forcefield.
    Yu Z; Lau D
    J Mol Model; 2015 May; 21(5):128. PubMed ID: 25914123
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Perspective on Integrative Simulations of Bioenergetic Domains.
    Pirnia A; Maqdisi R; Mittal S; Sener M; Singharoy A
    J Phys Chem B; 2024 Apr; 128(14):3302-3319. PubMed ID: 38562105
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Loss of Molecular Roughness upon Coarse-Graining Predicts the Artificially Accelerated Mobility of Coarse-Grained Molecular Simulation Models.
    Meinel MK; Müller-Plathe F
    J Chem Theory Comput; 2020 Mar; 16(3):1411-1419. PubMed ID: 31999452
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 10.