These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

150 related articles for article (PubMed ID: 24494671)

  • 1. QC metrics from CPTAC raw LC-MS/MS data interpreted through multivariate statistics.
    Wang X; Chambers MC; Vega-Montoto LJ; Bunk DM; Stein SE; Tabb DL
    Anal Chem; 2014 Mar; 86(5):2497-509. PubMed ID: 24494671
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Statistical Assessment of QC Metrics on Raw LC-MS/MS Data.
    Wang X
    Methods Mol Biol; 2017; 1550():325-337. PubMed ID: 28188539
    [TBL] [Abstract][Full Text] [Related]  

  • 3. QuaMeter: multivendor performance metrics for LC-MS/MS proteomics instrumentation.
    Ma ZQ; Polzin KO; Dasari S; Chambers MC; Schilling B; Gibson BW; Tran BQ; Vega-Montoto L; Liebler DC; Tabb DL
    Anal Chem; 2012 Jul; 84(14):5845-50. PubMed ID: 22697456
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Performance metrics for liquid chromatography-tandem mass spectrometry systems in proteomics analyses.
    Rudnick PA; Clauser KR; Kilpatrick LE; Tchekhovskoi DV; Neta P; Blonder N; Billheimer DD; Blackman RK; Bunk DM; Cardasis HL; Ham AJ; Jaffe JD; Kinsinger CR; Mesri M; Neubert TA; Schilling B; Tabb DL; Tegeler TJ; Vega-Montoto L; Variyath AM; Wang M; Wang P; Whiteaker JR; Zimmerman LJ; Carr SA; Fisher SJ; Gibson BW; Paulovich AG; Regnier FE; Rodriguez H; Spiegelman C; Tempst P; Liebler DC; Stein SE
    Mol Cell Proteomics; 2010 Feb; 9(2):225-41. PubMed ID: 19837981
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Reproducibility of Differential Proteomic Technologies in CPTAC Fractionated Xenografts.
    Tabb DL; Wang X; Carr SA; Clauser KR; Mertins P; Chambers MC; Holman JD; Wang J; Zhang B; Zimmerman LJ; Chen X; Gunawardena HP; Davies SR; Ellis MJ; Li S; Townsend RR; Boja ES; Ketchum KA; Kinsinger CR; Mesri M; Rodriguez H; Liu T; Kim S; McDermott JE; Payne SH; Petyuk VA; Rodland KD; Smith RD; Yang F; Chan DW; Zhang B; Zhang H; Zhang Z; Zhou JY; Liebler DC
    J Proteome Res; 2016 Mar; 15(3):691-706. PubMed ID: 26653538
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Establishing Quality Control Procedures for Large-Scale Plasma Proteomics Analyses.
    Patterson KL; Arul AB; Choi MJ; Oliver NC; Whitaker MD; Bodrick AC; Libby JB; Hansen S; Dumitrescu L; Gifford KA; Jefferson AL; Hohman TJ; Robinson RAS
    J Am Soc Mass Spectrom; 2023 Jun; 34(6):1105-1116. PubMed ID: 37163770
    [TBL] [Abstract][Full Text] [Related]  

  • 7. LogViewer: a software tool to visualize quality control parameters to optimize proteomics experiments using Orbitrap and LTQ-FT mass spectrometers.
    Sweredoski MJ; Smith GT; Kalli A; Graham RL; Hess S
    J Biomol Tech; 2011 Dec; 22(4):122-6. PubMed ID: 22131886
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Interrogating Fractionation and Other Sources of Variability in Shotgun Proteomes Using Quality Metrics.
    Kriek M; Monyai K; Magcwebeba TU; Du Plessis N; Stoychev SH; Tabb DL
    Proteomics; 2020 Nov; 20(21-22):e1900382. PubMed ID: 32415754
    [TBL] [Abstract][Full Text] [Related]  

  • 9. QCMAP: An Interactive Web-Tool for Performance Diagnosis and Prediction of LC-MS Systems.
    Kim T; Chen IR; Parker BL; Humphrey SJ; Crossett B; Cordwell SJ; Yang P; Yang JYH
    Proteomics; 2019 Jul; 19(13):e1900068. PubMed ID: 31099962
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Implementation of statistical process control for proteomic experiments via LC MS/MS.
    Bereman MS; Johnson R; Bollinger J; Boss Y; Shulman N; MacLean B; Hoofnagle AN; MacCoss MJ
    J Am Soc Mass Spectrom; 2014 Apr; 25(4):581-7. PubMed ID: 24496601
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Repeatability and reproducibility in proteomic identifications by liquid chromatography-tandem mass spectrometry.
    Tabb DL; Vega-Montoto L; Rudnick PA; Variyath AM; Ham AJ; Bunk DM; Kilpatrick LE; Billheimer DD; Blackman RK; Cardasis HL; Carr SA; Clauser KR; Jaffe JD; Kowalski KA; Neubert TA; Regnier FE; Schilling B; Tegeler TJ; Wang M; Wang P; Whiteaker JR; Zimmerman LJ; Fisher SJ; Gibson BW; Kinsinger CR; Mesri M; Rodriguez H; Stein SE; Tempst P; Paulovich AG; Liebler DC; Spiegelman C
    J Proteome Res; 2010 Feb; 9(2):761-76. PubMed ID: 19921851
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Shape-based feature matching improves protein identification via LC-MS and tandem MS.
    Noy K; Towfic F; Wittenberg GM; Fasulo D
    J Comput Biol; 2011 Apr; 18(4):547-57. PubMed ID: 21417940
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Performance metrics for evaluating system suitability in liquid chromatography--Mass spectrometry peptide mass mapping of protein therapeutics and monoclonal antibodies.
    Zhou M; Gucinski AC; Boyne MT
    MAbs; 2015; 7(6):1104-17. PubMed ID: 26218711
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Tools for monitoring system suitability in LC MS/MS centric proteomic experiments.
    Bereman MS
    Proteomics; 2015 Mar; 15(5-6):891-902. PubMed ID: 25327420
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Proteomics Quality Control: Quality Control Software for MaxQuant Results.
    Bielow C; Mastrobuoni G; Kempa S
    J Proteome Res; 2016 Mar; 15(3):777-87. PubMed ID: 26653327
    [TBL] [Abstract][Full Text] [Related]  

  • 16. MZDASoft: a software architecture that enables large-scale comparison of protein expression levels over multiple samples based on liquid chromatography/tandem mass spectrometry.
    Ghanat Bari M; Ramirez N; Wang Z; Zhang JM
    Rapid Commun Mass Spectrom; 2015 Oct; 29(19):1841-8. PubMed ID: 26331936
    [TBL] [Abstract][Full Text] [Related]  

  • 17. iPhos: a toolkit to streamline the alkaline phosphatase-assisted comprehensive LC-MS phosphoproteome investigation.
    Yang TH; Chang HT; Hsiao ES; Sun JL; Wang CC; Wu HY; Liao PC; Wu WS
    BMC Bioinformatics; 2014; 15 Suppl 16(Suppl 16):S10. PubMed ID: 25521246
    [TBL] [Abstract][Full Text] [Related]  

  • 18. The 2012/2013 ABRF Proteomic Research Group Study: Assessing Longitudinal Intralaboratory Variability in Routine Peptide Liquid Chromatography Tandem Mass Spectrometry Analyses.
    Bennett KL; Wang X; Bystrom CE; Chambers MC; Andacht TM; Dangott LJ; Elortza F; Leszyk J; Molina H; Moritz RL; Phinney BS; Thompson JW; Bunger MK; Tabb DL
    Mol Cell Proteomics; 2015 Dec; 14(12):3299-309. PubMed ID: 26435129
    [TBL] [Abstract][Full Text] [Related]  

  • 19. ScanRanker: Quality assessment of tandem mass spectra via sequence tagging.
    Ma ZQ; Chambers MC; Ham AJ; Cheek KL; Whitwell CW; Aerni HR; Schilling B; Miller AW; Caprioli RM; Tabb DL
    J Proteome Res; 2011 Jul; 10(7):2896-904. PubMed ID: 21520941
    [TBL] [Abstract][Full Text] [Related]  

  • 20. SIMPATIQCO: a server-based software suite which facilitates monitoring the time course of LC-MS performance metrics on Orbitrap instruments.
    Pichler P; Mazanek M; Dusberger F; Weilnböck L; Huber CG; Stingl C; Luider TM; Straube WL; Köcher T; Mechtler K
    J Proteome Res; 2012 Nov; 11(11):5540-7. PubMed ID: 23088386
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.