These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

235 related articles for article (PubMed ID: 24516375)

  • 21. Yeast9: a consensus genome-scale metabolic model for S. cerevisiae curated by the community.
    Zhang C; Sánchez BJ; Li F; Eiden CWQ; Scott WT; Liebal UW; Blank LM; Mengers HG; Anton M; Rangel AT; Mendoza SN; Zhang L; Nielsen J; Lu H; Kerkhoven EJ
    Mol Syst Biol; 2024 Oct; 20(10):1134-1150. PubMed ID: 39134886
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Yeast 5 - an expanded reconstruction of the Saccharomyces cerevisiae metabolic network.
    Heavner BD; Smallbone K; Barker B; Mendes P; Walker LP
    BMC Syst Biol; 2012 Jun; 6():55. PubMed ID: 22663945
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Flux coupling analysis of genome-scale metabolic network reconstructions.
    Burgard AP; Nikolaev EV; Schilling CH; Maranas CD
    Genome Res; 2004 Feb; 14(2):301-12. PubMed ID: 14718379
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Genome-scale consequences of cofactor balancing in engineered pentose utilization pathways in Saccharomyces cerevisiae.
    Ghosh A; Zhao H; Price ND
    PLoS One; 2011; 6(11):e27316. PubMed ID: 22076150
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Leveraging single-cell genomics to expand the fungal tree of life.
    Ahrendt SR; Quandt CA; Ciobanu D; Clum A; Salamov A; Andreopoulos B; Cheng JF; Woyke T; Pelin A; Henrissat B; Reynolds NK; Benny GL; Smith ME; James TY; Grigoriev IV
    Nat Microbiol; 2018 Dec; 3(12):1417-1428. PubMed ID: 30297742
    [TBL] [Abstract][Full Text] [Related]  

  • 26. A practical guide to genome-scale metabolic models and their analysis.
    Santos F; Boele J; Teusink B
    Methods Enzymol; 2011; 500():509-32. PubMed ID: 21943912
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Evolutionary relationships between Saccharomyces cerevisiae and other fungal species as determined from genome comparisons.
    Herrero E
    Rev Iberoam Micol; 2005 Dec; 22(4):217-22. PubMed ID: 16499414
    [TBL] [Abstract][Full Text] [Related]  

  • 28. A hybrid of Cuckoo Search and Minimization of Metabolic Adjustment to optimize metabolites production in genome-scale models.
    Arif MA; Mohamad MS; Abd Latif MS; Deris S; Remli MA; Mohd Daud K; Ibrahim Z; Omatu S; Corchado JM
    Comput Biol Med; 2018 Nov; 102():112-119. PubMed ID: 30267898
    [TBL] [Abstract][Full Text] [Related]  

  • 29. [Reconstruction and application of genome-scale metabolic network model].
    Liu L; Chen J
    Sheng Wu Gong Cheng Xue Bao; 2010 Sep; 26(9):1176-86. PubMed ID: 21141107
    [TBL] [Abstract][Full Text] [Related]  

  • 30. SWIFTCORE: a tool for the context-specific reconstruction of genome-scale metabolic networks.
    Tefagh M; Boyd SP
    BMC Bioinformatics; 2020 Apr; 21(1):140. PubMed ID: 32293238
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Simultaneous inference of biological networks of multiple species from genome-wide data and evolutionary information: a semi-supervised approach.
    Kashima H; Yamanishi Y; Kato T; Sugiyama M; Tsuda K
    Bioinformatics; 2009 Nov; 25(22):2962-8. PubMed ID: 19689962
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Manually curated genome-scale reconstruction of the metabolic network of Bacillus megaterium DSM319.
    Aminian-Dehkordi J; Mousavi SM; Jafari A; Mijakovic I; Marashi SA
    Sci Rep; 2019 Dec; 9(1):18762. PubMed ID: 31822710
    [TBL] [Abstract][Full Text] [Related]  

  • 33. F2C2: a fast tool for the computation of flux coupling in genome-scale metabolic networks.
    Larhlimi A; David L; Selbig J; Bockmayr A
    BMC Bioinformatics; 2012 Apr; 13():57. PubMed ID: 22524245
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Ancestral state reconstruction of metabolic pathways across pangenome ensembles.
    Psomopoulos FE; van Helden J; Médigue C; Chasapi A; Ouzounis CA
    Microb Genom; 2020 Nov; 6(11):. PubMed ID: 32924924
    [TBL] [Abstract][Full Text] [Related]  

  • 35. The birth, evolution and death of metabolic gene clusters in fungi.
    Rokas A; Wisecaver JH; Lind AL
    Nat Rev Microbiol; 2018 Dec; 16(12):731-744. PubMed ID: 30194403
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Large-scale 13C-flux analysis reveals mechanistic principles of metabolic network robustness to null mutations in yeast.
    Blank LM; Kuepfer L; Sauer U
    Genome Biol; 2005; 6(6):R49. PubMed ID: 15960801
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Genome-scale reconstruction and analysis of the Pseudomonas putida KT2440 metabolic network facilitates applications in biotechnology.
    Puchałka J; Oberhardt MA; Godinho M; Bielecka A; Regenhardt D; Timmis KN; Papin JA; Martins dos Santos VA
    PLoS Comput Biol; 2008 Oct; 4(10):e1000210. PubMed ID: 18974823
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Improved annotation through genome-scale metabolic modeling of Aspergillus oryzae.
    Vongsangnak W; Olsen P; Hansen K; Krogsgaard S; Nielsen J
    BMC Genomics; 2008 May; 9():245. PubMed ID: 18500999
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Patterns of Conservation and Diversification in the Fungal Polarization Network.
    Diepeveen ET; Gehrmann T; Pourquié V; Abeel T; Laan L
    Genome Biol Evol; 2018 Jul; 10(7):1765-1782. PubMed ID: 29931311
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Inferring branching pathways in genome-scale metabolic networks.
    Pitkänen E; Jouhten P; Rousu J
    BMC Syst Biol; 2009 Oct; 3():103. PubMed ID: 19874610
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 12.