346 related articles for article (PubMed ID: 24516555)
1. Characterization of the 18S rRNA gene for designing universal eukaryote specific primers.
Hadziavdic K; Lekang K; Lanzen A; Jonassen I; Thompson EM; Troedsson C
PLoS One; 2014; 9(2):e87624. PubMed ID: 24516555
[TBL] [Abstract][Full Text] [Related]
2. A comprehensive fungi-specific 18S rRNA gene sequence primer toolkit suited for diverse research issues and sequencing platforms.
Banos S; Lentendu G; Kopf A; Wubet T; Glöckner FO; Reich M
BMC Microbiol; 2018 Nov; 18(1):190. PubMed ID: 30458701
[TBL] [Abstract][Full Text] [Related]
3. Short- and long-read metabarcoding of the eukaryotic rRNA operon: Evaluation of primers and comparison to shotgun metagenomics sequencing.
Latz MAC; Grujcic V; Brugel S; Lycken J; John U; Karlson B; Andersson A; Andersson AF
Mol Ecol Resour; 2022 Aug; 22(6):2304-2318. PubMed ID: 35437888
[TBL] [Abstract][Full Text] [Related]
4. Systematic design of 18S rRNA gene primers for determining eukaryotic diversity in microbial consortia.
Hugerth LW; Muller EE; Hu YO; Lebrun LA; Roume H; Lundin D; Wilmes P; Andersson AF
PLoS One; 2014; 9(4):e95567. PubMed ID: 24755918
[TBL] [Abstract][Full Text] [Related]
5. Identifying group-specific primers for environmental Heterolobosa by high-throughput sequencing.
Delafont V; Mercier A; Barrouilhet S; Mollichella ML; Herbelin P; Héchard Y
Microb Biotechnol; 2022 Sep; 15(9):2476-2487. PubMed ID: 35920130
[TBL] [Abstract][Full Text] [Related]
6. Comparative study of the validity of three regions of the 18S-rRNA gene for massively parallel sequencing-based monitoring of the planktonic eukaryote community.
Tanabe AS; Nagai S; Hida K; Yasuike M; Fujiwara A; Nakamura Y; Takano Y; Katakura S
Mol Ecol Resour; 2016 Mar; 16(2):402-14. PubMed ID: 26309223
[TBL] [Abstract][Full Text] [Related]
7. Comparative analyses of the V4 and V9 regions of 18S rDNA for the extant eukaryotic community using the Illumina platform.
Choi J; Park JS
Sci Rep; 2020 Apr; 10(1):6519. PubMed ID: 32300168
[TBL] [Abstract][Full Text] [Related]
8. Optimal eukaryotic 18S and universal 16S/18S ribosomal RNA primers and their application in a study of symbiosis.
Wang Y; Tian RM; Gao ZM; Bougouffa S; Qian PY
PLoS One; 2014; 9(3):e90053. PubMed ID: 24594623
[TBL] [Abstract][Full Text] [Related]
9. pr2-primers: An 18S rRNA primer database for protists.
Vaulot D; Geisen S; Mahé F; Bass D
Mol Ecol Resour; 2022 Jan; 22(1):168-179. PubMed ID: 34251760
[TBL] [Abstract][Full Text] [Related]
10. PCR-based diversity estimates of artificial and environmental 18S rRNA gene libraries.
Potvin M; Lovejoy C
J Eukaryot Microbiol; 2009; 56(2):174-81. PubMed ID: 21462550
[TBL] [Abstract][Full Text] [Related]
11. Design and Evaluation of Illumina MiSeq-Compatible, 18S rRNA Gene-Specific Primers for Improved Characterization of Mixed Phototrophic Communities.
Bradley IM; Pinto AJ; Guest JS
Appl Environ Microbiol; 2016 Oct; 82(19):5878-91. PubMed ID: 27451454
[TBL] [Abstract][Full Text] [Related]
12. Estimating Protistan Diversity Using High-Throughput Sequencing.
Hu SK; Liu Z; Lie AA; Countway PD; Kim DY; Jones AC; Gast RJ; Cary SC; Sherr EB; Sherr BF; Caron DA
J Eukaryot Microbiol; 2015; 62(5):688-93. PubMed ID: 25851049
[TBL] [Abstract][Full Text] [Related]
13. Identification of microorganisms by PCR amplification and sequencing of a universal amplified ribosomal region present in both prokaryotes and eukaryotes.
Rivas R; Velázquez E; Zurdo-Piñeiro JL; Mateos PF; Martínez Molina E
J Microbiol Methods; 2004 Mar; 56(3):413-26. PubMed ID: 14967233
[TBL] [Abstract][Full Text] [Related]
14. Intracellular diversity of the V4 and V9 regions of the 18S rRNA in marine protists (radiolarians) assessed by high-throughput sequencing.
Decelle J; Romac S; Sasaki E; Not F; Mahé F
PLoS One; 2014; 9(8):e104297. PubMed ID: 25090095
[TBL] [Abstract][Full Text] [Related]
15. Improved 18S and 28S rDNA primer sets for NGS-based parasite detection.
Kounosu A; Murase K; Yoshida A; Maruyama H; Kikuchi T
Sci Rep; 2019 Oct; 9(1):15789. PubMed ID: 31673037
[TBL] [Abstract][Full Text] [Related]
16. Design and experimental application of a novel non-degenerate universal primer set that amplifies prokaryotic 16S rRNA genes with a low possibility to amplify eukaryotic rRNA genes.
Mori H; Maruyama F; Kato H; Toyoda A; Dozono A; Ohtsubo Y; Nagata Y; Fujiyama A; Tsuda M; Kurokawa K
DNA Res; 2014; 21(2):217-27. PubMed ID: 24277737
[TBL] [Abstract][Full Text] [Related]
17. Enigmatic Diphyllatea eukaryotes: culturing and targeted PacBio RS amplicon sequencing reveals a higher order taxonomic diversity and global distribution.
Orr RJS; Zhao S; Klaveness D; Yabuki A; Ikeda K; Watanabe MM; Shalchian-Tabrizi K
BMC Evol Biol; 2018 Jul; 18(1):115. PubMed ID: 30021531
[TBL] [Abstract][Full Text] [Related]
18. Investigating microbial eukaryotic diversity from a global census: insights from a comparison of pyrotag and full-length sequences of 18S rRNA genes.
Lie AA; Liu Z; Hu SK; Jones AC; Kim DY; Countway PD; Amaral-Zettler LA; Cary SC; Sherr EB; Sherr BF; Gast RJ; Caron DA
Appl Environ Microbiol; 2014 Jul; 80(14):4363-73. PubMed ID: 24814788
[TBL] [Abstract][Full Text] [Related]
19. Comprehensive single-PCR 16S and 18S rRNA community analysis validated with mock communities, and estimation of sequencing bias against 18S.
Yeh YC; McNichol J; Needham DM; Fichot EB; Berdjeb L; Fuhrman JA
Environ Microbiol; 2021 Jun; 23(6):3240-3250. PubMed ID: 33938123
[TBL] [Abstract][Full Text] [Related]
20. Restriction enzyme digestion of host DNA enhances universal detection of parasitic pathogens in blood via targeted amplicon deep sequencing.
Flaherty BR; Talundzic E; Barratt J; Kines KJ; Olsen C; Lane M; Sheth M; Bradbury RS
Microbiome; 2018 Sep; 6(1):164. PubMed ID: 30223888
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]