183 related articles for article (PubMed ID: 24523351)
1. 5'-O-Methylphosphonate nucleic acids--new modified DNAs that increase the Escherichia coli RNase H cleavage rate of hybrid duplexes.
Šipova H; Špringer T; Rejman D; Šimak O; Petrová M; Novák P; Rosenbergová Š; Páv O; Liboska R; Barvík I; Štěpanek J; Rosenberg I; Homola J
Nucleic Acids Res; 2014 Apr; 42(8):5378-89. PubMed ID: 24523351
[TBL] [Abstract][Full Text] [Related]
2. Binding affinity and specificity of Escherichia coli RNase H1: impact on the kinetics of catalysis of antisense oligonucleotide-RNA hybrids.
Lima WF; Crooke ST
Biochemistry; 1997 Jan; 36(2):390-8. PubMed ID: 9003192
[TBL] [Abstract][Full Text] [Related]
3. Comparison of the RNase H cleavage kinetics and blood serum stability of the north-conformationally constrained and 2'-alkoxy modified oligonucleotides.
Honcharenko D; Barman J; Varghese OP; Chattopadhyaya J
Biochemistry; 2007 May; 46(19):5635-46. PubMed ID: 17411072
[TBL] [Abstract][Full Text] [Related]
4. How RNase HI (Escherichia coli) promoted site-selective hydrolysis works on RNA in duplex with carba-LNA and LNA substituted antisense strands in an antisense strategy context?
Plashkevych O; Li Q; Chattopadhyaya J
Mol Biosyst; 2017 May; 13(5):921-938. PubMed ID: 28352859
[TBL] [Abstract][Full Text] [Related]
5. Oligonucleotides with isopolar phosphonate internucleotide linkage: a new perspective for antisense compounds?
Rejman D; Snásel J; Liboska R; Tocík Z; Paces O; Králíková S; Rinnová M; Kois P; Rosenberg I
Nucleosides Nucleotides Nucleic Acids; 2001; 20(4-7):819-23. PubMed ID: 11563123
[TBL] [Abstract][Full Text] [Related]
6. Kinetic characteristics of Escherichia coli RNase H1: cleavage of various antisense oligonucleotide-RNA duplexes.
Crooke ST; Lemonidis KM; Neilson L; Griffey R; Lesnik EA; Monia BP
Biochem J; 1995 Dec; 312 ( Pt 2)(Pt 2):599-608. PubMed ID: 8526876
[TBL] [Abstract][Full Text] [Related]
7. The influence of antisense oligonucleotide-induced RNA structure on Escherichia coli RNase H1 activity.
Lima WF; Mohan V; Crooke ST
J Biol Chem; 1997 Jul; 272(29):18191-9. PubMed ID: 9218455
[TBL] [Abstract][Full Text] [Related]
8. RNase H cleavage of RNA hybridized to oligonucleotides containing methylphosphonate, phosphorothioate and phosphodiester bonds.
Furdon PJ; Dominski Z; Kole R
Nucleic Acids Res; 1989 Nov; 17(22):9193-204. PubMed ID: 2555787
[TBL] [Abstract][Full Text] [Related]
9. Carba-LNA-5MeC/A/G/T modified oligos show nucleobase-specific modulation of 3'-exonuclease activity, thermodynamic stability, RNA selectivity, and RNase H elicitation: synthesis and biochemistry.
Upadhayaya R; Deshpande SG; Li Q; Kardile RA; Sayyed AY; Kshirsagar EK; Salunke RV; Dixit SS; Zhou C; Földesi A; Chattopadhyaya J
J Org Chem; 2011 Jun; 76(11):4408-31. PubMed ID: 21500818
[TBL] [Abstract][Full Text] [Related]
10. Efficient RNase H-directed cleavage of RNA promoted by antisense DNA or 2'F-ANA constructs containing acyclic nucleotide inserts.
Mangos MM; Min KL; Viazovkina E; Galarneau A; Elzagheid MI; Parniak MA; Damha MJ
J Am Chem Soc; 2003 Jan; 125(3):654-61. PubMed ID: 12526664
[TBL] [Abstract][Full Text] [Related]
11. RNase H sequence preferences influence antisense oligonucleotide efficiency.
Kielpinski LJ; Hagedorn PH; Lindow M; Vinther J
Nucleic Acids Res; 2017 Dec; 45(22):12932-12944. PubMed ID: 29126318
[TBL] [Abstract][Full Text] [Related]
12. RNase H is responsible for the non-specific inhibition of in vitro translation by 2'-O-alkyl chimeric oligonucleotides: high affinity or selectivity, a dilemma to design antisense oligomers.
Larrouy B; Boiziau C; Sproat B; Toulmé JJ
Nucleic Acids Res; 1995 Sep; 23(17):3434-40. PubMed ID: 7567453
[TBL] [Abstract][Full Text] [Related]
13. Number and distribution of methylphosphonate linkages in oligodeoxynucleotides affect exo- and endonuclease sensitivity and ability to form RNase H substrates.
Quartin RS; Brakel CL; Wetmur JG
Nucleic Acids Res; 1989 Sep; 17(18):7253-62. PubMed ID: 2477796
[TBL] [Abstract][Full Text] [Related]
14. Enhanced RNase H activity with methylphosphonodiester/phosphodiester chimeric antisense oligodeoxynucleotides.
Giles RV; Tidd DM
Anticancer Drug Des; 1992 Feb; 7(1):37-48. PubMed ID: 1311929
[TBL] [Abstract][Full Text] [Related]
15. A critical survey of the structure-function of the antisense oligo/RNA heteroduplex as substrate for RNase H.
Zamaratski E; Pradeepkumar PI; Chattopadhyaya J
J Biochem Biophys Methods; 2001 May; 48(3):189-208. PubMed ID: 11384757
[TBL] [Abstract][Full Text] [Related]
16. E. coli RNase HI and the phosphonate-DNA/RNA hybrid: molecular dynamics simulations.
Barvik I
Nucleosides Nucleotides Nucleic Acids; 2005; 24(5-7):435-41. PubMed ID: 16247966
[TBL] [Abstract][Full Text] [Related]
17. RNA-DNA hybrids containing damaged DNA are substrates for RNase H.
Shiels JC; Jerkovic B; Baranger AM; Bolton PH
Bioorg Med Chem Lett; 2001 Oct; 11(19):2623-6. PubMed ID: 11551764
[TBL] [Abstract][Full Text] [Related]
18. Cleavage of single strand RNA adjacent to RNA-DNA duplex regions by Escherichia coli RNase H1.
Lima WF; Crooke ST
J Biol Chem; 1997 Oct; 272(44):27513-6. PubMed ID: 9346880
[TBL] [Abstract][Full Text] [Related]
19. A short phosphodiester window is sufficient to direct RNase H-dependent RNA cleavage by antisense peptide nucleic acid.
Malchère C; Verheijen J; van der Laan S; Bastide L; van Boom J; Lebleu B; Robbins I
Antisense Nucleic Acid Drug Dev; 2000 Dec; 10(6):463-8. PubMed ID: 11198930
[TBL] [Abstract][Full Text] [Related]
20. Potent gene-specific inhibitory properties of mixed-backbone antisense oligonucleotides comprised of 2'-deoxy-2'-fluoro-D-arabinose and 2'-deoxyribose nucleotides.
Lok CN; Viazovkina E; Min KL; Nagy E; Wilds CJ; Damha MJ; Parniak MA
Biochemistry; 2002 Mar; 41(10):3457-67. PubMed ID: 11876654
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
