BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

124 related articles for article (PubMed ID: 24564294)

  • 1. Provenance in bioinformatics workflows.
    de Paula R; Holanda M; Gomes LS; Lifschitz S; Walter ME
    BMC Bioinformatics; 2013; 14 Suppl 11(Suppl 11):S6. PubMed ID: 24564294
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Classification of bioinformatics workflows using weighted versions of partitioning and hierarchical clustering algorithms.
    Lord E; Diallo AB; Makarenkov V
    BMC Bioinformatics; 2015 Mar; 16():68. PubMed ID: 25887434
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Facilitating bioinformatics reproducibility with QIIME 2 Provenance Replay.
    Keefe CR; Dillon MR; Gehret E; Herman C; Jewell M; Wood CV; Bolyen E; Caporaso JG
    PLoS Comput Biol; 2023 Nov; 19(11):e1011676. PubMed ID: 38011287
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Investigating reproducibility and tracking provenance - A genomic workflow case study.
    Kanwal S; Khan FZ; Lonie A; Sinnott RO
    BMC Bioinformatics; 2017 Jul; 18(1):337. PubMed ID: 28701218
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Bioinformatics Workflows With NoSQL Database in Cloud Computing.
    Wercelens P; da Silva W; Hondo F; Castro K; Walter ME; Araújo A; Lifschitz S; Holanda M
    Evol Bioinform Online; 2019; 15():1176934319889974. PubMed ID: 31839702
    [TBL] [Abstract][Full Text] [Related]  

  • 6. BioWorkbench: a high-performance framework for managing and analyzing bioinformatics experiments.
    Mondelli ML; Magalhães T; Loss G; Wilde M; Foster I; Mattoso M; Katz D; Barbosa H; de Vasconcelos ATR; Ocaña K; Gadelha LMR
    PeerJ; 2018; 6():e5551. PubMed ID: 30186700
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Biowep: a workflow enactment portal for bioinformatics applications.
    Romano P; Bartocci E; Bertolini G; De Paoli F; Marra D; Mauri G; Merelli E; Milanesi L
    BMC Bioinformatics; 2007 Mar; 8 Suppl 1(Suppl 1):S19. PubMed ID: 17430563
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Sharing interoperable workflow provenance: A review of best practices and their practical application in CWLProv.
    Khan FZ; Soiland-Reyes S; Sinnott RO; Lonie A; Goble C; Crusoe MR
    Gigascience; 2019 Nov; 8(11):. PubMed ID: 31675414
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Identifying impact of software dependencies on replicability of biomedical workflows.
    Miksa T; Rauber A; Mina E
    J Biomed Inform; 2016 Dec; 64():232-254. PubMed ID: 27789415
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Semantic workflows for benchmark challenges: Enhancing comparability, reusability and reproducibility.
    Srivastava A; Adusumilli R; Boyce H; Garijo D; Ratnakar V; Mayani R; Yu T; Machiraju R; Gil Y; Mallick P
    Pac Symp Biocomput; 2019; 24():208-219. PubMed ID: 30864323
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Workflows in bioinformatics: meta-analysis and prototype implementation of a workflow generator.
    Garcia Castro A; Thoraval S; Garcia LJ; Ragan MA
    BMC Bioinformatics; 2005 Apr; 6():87. PubMed ID: 15813976
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Workflows for microarray data processing in the Kepler environment.
    Stropp T; McPhillips T; Ludäscher B; Bieda M
    BMC Bioinformatics; 2012 May; 13():102. PubMed ID: 22594911
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A workflow reproducibility scale for automatic validation of biological interpretation results.
    Suetake H; Fukusato T; Igarashi T; Ohta T
    Gigascience; 2022 Dec; 12():. PubMed ID: 37150537
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Watchdog - a workflow management system for the distributed analysis of large-scale experimental data.
    Kluge M; Friedel CC
    BMC Bioinformatics; 2018 Mar; 19(1):97. PubMed ID: 29534677
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Provenance-and machine learning-based recommendation of parameter values in scientific workflows.
    Silva Junior D; Pacitti E; Paes A; de Oliveira D
    PeerJ Comput Sci; 2021; 7():e606. PubMed ID: 34307859
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Support for Taverna workflows in the VPH-Share cloud platform.
    Kasztelnik M; Coto E; Bubak M; Malawski M; Nowakowski P; Arenas J; Saglimbeni A; Testi D; Frangi AF
    Comput Methods Programs Biomed; 2017 Jul; 146():37-46. PubMed ID: 28688488
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Building Containerized Workflows Using the BioDepot-Workflow-Builder.
    Hung LH; Hu J; Meiss T; Ingersoll A; Lloyd W; Kristiyanto D; Xiong Y; Sobie E; Yeung KY
    Cell Syst; 2019 Nov; 9(5):508-514.e3. PubMed ID: 31521606
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A bioinformatics workflow to decipher transcriptomic data from vitamin D studies.
    Muñoz García A; Eijssen LM; Kutmon M; Sarathy C; Cengo A; Hewison M; Evelo CT; Lenz M; Coort SL
    J Steroid Biochem Mol Biol; 2019 May; 189():28-35. PubMed ID: 30716464
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Making sense of an alphabet soup: the use of a new bioinformatics tool for identification of novel gene islands. Focus on "identification of genomic islands in the genome of Bacillus cereus by comparative analysis with Bacillus anthracis".
    Charkowski AO
    Physiol Genomics; 2004 Jan; 16(2):180-1. PubMed ID: 14726601
    [No Abstract]   [Full Text] [Related]  

  • 20. Raw transcriptomics data to gene specific SSRs: a validated free bioinformatics workflow for biologists.
    Naranpanawa DNU; Chandrasekara CHWMRB; Bandaranayake PCG; Bandaranayake AU
    Sci Rep; 2020 Oct; 10(1):18236. PubMed ID: 33106560
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.