These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
62 related articles for article (PubMed ID: 24572770)
21. A similarity network approach for the analysis and comparison of protein sequence/structure sets. Valavanis I; Spyrou G; Nikita K J Biomed Inform; 2010 Apr; 43(2):257-67. PubMed ID: 20097308 [TBL] [Abstract][Full Text] [Related]
23. Assessing annotation transfer for genomics: quantifying the relations between protein sequence, structure and function through traditional and probabilistic scores. Wilson CA; Kreychman J; Gerstein M J Mol Biol; 2000 Mar; 297(1):233-49. PubMed ID: 10704319 [TBL] [Abstract][Full Text] [Related]
25. A local alignment method for protein structure motifs. Orengo CA; Taylor WR J Mol Biol; 1993 Oct; 233(3):488-97. PubMed ID: 8411157 [TBL] [Abstract][Full Text] [Related]
26. Automatic generation and evaluation of sparse protein signatures for families of protein structural domains. Blades MJ; Ison JC; Ranasinghe R; Findlay JB Protein Sci; 2005 Jan; 14(1):13-23. PubMed ID: 15608116 [TBL] [Abstract][Full Text] [Related]
27. Average core structures and variability measures for protein families: application to the immunoglobulins. Gerstein M; Altman RB J Mol Biol; 1995 Aug; 251(1):161-75. PubMed ID: 7643385 [TBL] [Abstract][Full Text] [Related]
28. Cluster-C, an algorithm for the large-scale clustering of protein sequences based on the extraction of maximal cliques. Mohseni-Zadeh S; Brézellec P; Risler J- Comput Biol Chem; 2004 Jul; 28(3):211-8. PubMed ID: 15261151 [TBL] [Abstract][Full Text] [Related]
29. Multiple sequence threading: an analysis of alignment quality and stability. Taylor WR J Mol Biol; 1997 Jun; 269(5):902-43. PubMed ID: 9223650 [TBL] [Abstract][Full Text] [Related]
31. Density Peak clustering of protein sequences associated to a Pfam clan reveals clear similarities and interesting differences with respect to manual family annotation. Russo ET; Laio A; Punta M BMC Bioinformatics; 2021 Mar; 22(1):121. PubMed ID: 33711918 [TBL] [Abstract][Full Text] [Related]
32. Drosophila stretchin-MLCK is a novel member of the Titin/Myosin light chain kinase family. Champagne MB; Edwards KA; Erickson HP; Kiehart DP J Mol Biol; 2000 Jul; 300(4):759-77. PubMed ID: 10891286 [TBL] [Abstract][Full Text] [Related]
33. SnapDRAGON: a method to delineate protein structural domains from sequence data. George RA; Heringa J J Mol Biol; 2002 Feb; 316(3):839-51. PubMed ID: 11866536 [TBL] [Abstract][Full Text] [Related]
34. GeneRAGE: a robust algorithm for sequence clustering and domain detection. Enright AJ; Ouzounis CA Bioinformatics; 2000 May; 16(5):451-7. PubMed ID: 10871267 [TBL] [Abstract][Full Text] [Related]
35. Improvement of domain-level ortholog clustering by optimizing domain-specific sum-of-pairs score. Chiba H; Uchiyama I BMC Bioinformatics; 2014 May; 15():148. PubMed ID: 24885064 [TBL] [Abstract][Full Text] [Related]
36. Towards a covering set of protein family profiles. Heger A; Holm L Prog Biophys Mol Biol; 2000; 73(5):321-37. PubMed ID: 11063778 [TBL] [Abstract][Full Text] [Related]
37. Characterisation of protein structure/function relationship by sequence analysis without previous alignment: distinction between sub-groups of protein kinases. Guerrucci MA; Bellé R Biosci Rep; 1995 Jun; 15(3):161-71. PubMed ID: 7579041 [TBL] [Abstract][Full Text] [Related]
38. DomSVR: domain boundary prediction with support vector regression from sequence information alone. Chen P; Liu C; Burge L; Li J; Mohammad M; Southerland W; Gloster C; Wang B Amino Acids; 2010 Aug; 39(3):713-26. PubMed ID: 20165918 [TBL] [Abstract][Full Text] [Related]
39. An alignment-free domain architecture similarity search (ADASS) algorithm for inferring homology between multi-domain proteins. Syamaladevi DP; Joshi A; Sowdhamini R Bioinformation; 2013; 9(10):491-9. PubMed ID: 23861564 [TBL] [Abstract][Full Text] [Related]
40. Clustering and analysis of protein families. Kriventseva EV; Biswas M; Apweiler R Curr Opin Struct Biol; 2001 Jun; 11(3):334-9. PubMed ID: 11406384 [TBL] [Abstract][Full Text] [Related] [Previous] [Next] [New Search]