237 related articles for article (PubMed ID: 24577361)
1. Mapping the miRNA interactome by cross-linking ligation and sequencing of hybrids (CLASH).
Helwak A; Tollervey D
Nat Protoc; 2014 Mar; 9(3):711-28. PubMed ID: 24577361
[TBL] [Abstract][Full Text] [Related]
2. Identification of miRNA-Target RNA Interactions Using CLASH.
Helwak A; Tollervey D
Methods Mol Biol; 2016; 1358():229-51. PubMed ID: 26463387
[TBL] [Abstract][Full Text] [Related]
3. Identify MicroRNA Targets Using AGO2-CLASH (Cross-linking, Ligation, and Sequencing of Hybrids) and AGO2-CLIP (Cross-Linking and Immuno-Precipitation) in Cells with or Without the MicroRNA of Interest Depleted.
Kato M
Methods Mol Biol; 2023; 2666():137-147. PubMed ID: 37166662
[TBL] [Abstract][Full Text] [Related]
4. Hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data.
Travis AJ; Moody J; Helwak A; Tollervey D; Kudla G
Methods; 2014 Feb; 65(3):263-73. PubMed ID: 24211736
[TBL] [Abstract][Full Text] [Related]
5. Improving miRNA Target Prediction Using CLASH Data.
Li X; Hu H
Methods Mol Biol; 2019; 1970():75-83. PubMed ID: 30963489
[TBL] [Abstract][Full Text] [Related]
6. Modified Cross-Linking, Ligation, and Sequencing of Hybrids (qCLASH) Identifies Kaposi's Sarcoma-Associated Herpesvirus MicroRNA Targets in Endothelial Cells.
Gay LA; Sethuraman S; Thomas M; Turner PC; Renne R
J Virol; 2018 Apr; 92(8):. PubMed ID: 29386283
[TBL] [Abstract][Full Text] [Related]
7. Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding.
Helwak A; Kudla G; Dudnakova T; Tollervey D
Cell; 2013 Apr; 153(3):654-65. PubMed ID: 23622248
[TBL] [Abstract][Full Text] [Related]
8. Modified Cross-Linking, Ligation, and Sequencing of Hybrids (qCLASH) to Identify MicroRNA Targets.
Gay LA; Turner PC; Renne R
Curr Protoc; 2021 Oct; 1(10):e257. PubMed ID: 34610213
[TBL] [Abstract][Full Text] [Related]
9. Identification of ARGONAUTE/Small RNA Cleavage Sites by Degradome Sequencing.
Baksa I; Szittya G
Methods Mol Biol; 2017; 1640():113-128. PubMed ID: 28608337
[TBL] [Abstract][Full Text] [Related]
10. Learning to Predict miRNA-mRNA Interactions from AGO CLIP Sequencing and CLASH Data.
Lu Y; Leslie CS
PLoS Comput Biol; 2016 Jul; 12(7):e1005026. PubMed ID: 27438777
[TBL] [Abstract][Full Text] [Related]
11. Discovering circRNA-microRNA Interactions from CLIP-Seq Data.
Zhang XQ; Yang JH
Methods Mol Biol; 2018; 1724():193-207. PubMed ID: 29322451
[TBL] [Abstract][Full Text] [Related]
12. cCLIP-Seq: Retrieval of Chimeric Reads from HITS-CLIP (CLIP-Seq) Libraries.
Alexiou P; Maragkakis M; Mourelatos Z; Vourekas A
Methods Mol Biol; 2018; 1680():87-100. PubMed ID: 29030843
[TBL] [Abstract][Full Text] [Related]
13. Using hiCLIP to identify RNA duplexes that interact with a specific RNA-binding protein.
Sugimoto Y; Chakrabarti AM; Luscombe NM; Ule J
Nat Protoc; 2017 Mar; 12(3):611-637. PubMed ID: 28230851
[TBL] [Abstract][Full Text] [Related]
14. Immunoprecipitation and High-Throughput Sequencing of ARGONAUTE-Bound Target RNAs from Plants.
Carbonell A
Methods Mol Biol; 2017; 1640():93-112. PubMed ID: 28608336
[TBL] [Abstract][Full Text] [Related]
15. Identification of protein binding sites on U3 snoRNA and pre-rRNA by UV cross-linking and high-throughput analysis of cDNAs.
Granneman S; Kudla G; Petfalski E; Tollervey D
Proc Natl Acad Sci U S A; 2009 Jun; 106(24):9613-8. PubMed ID: 19482942
[TBL] [Abstract][Full Text] [Related]
16. Identification of circRNAs for miRNA Targets by Argonaute2 RNA Immunoprecipitation and Luciferase Screening Assays.
Li Y; Chen B; Huang S
Methods Mol Biol; 2018; 1724():209-218. PubMed ID: 29322452
[TBL] [Abstract][Full Text] [Related]
17. Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps.
Chi SW; Zang JB; Mele A; Darnell RB
Nature; 2009 Jul; 460(7254):479-86. PubMed ID: 19536157
[TBL] [Abstract][Full Text] [Related]
18. Identification and consequences of miRNA-target interactions--beyond repression of gene expression.
Hausser J; Zavolan M
Nat Rev Genet; 2014 Sep; 15(9):599-612. PubMed ID: 25022902
[TBL] [Abstract][Full Text] [Related]
19. Identifying miRNA Targets Using AGO-RIPseq.
Petri R; Jakobsson J
Methods Mol Biol; 2018; 1720():131-140. PubMed ID: 29236255
[TBL] [Abstract][Full Text] [Related]
20. High-throughput sequencing of RNAs isolated by cross-linking immunoprecipitation (HITS-CLIP) reveals Argonaute-associated microRNAs and targets in Schistosoma japonicum.
Zhao J; Luo R; Xu X; Zou Y; Zhang Q; Pan W
Parasit Vectors; 2015 Nov; 8():589. PubMed ID: 26577460
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]