220 related articles for article (PubMed ID: 24618468)
1. Genome-wide quantitative analysis of DNA methylation from bisulfite sequencing data.
Akman K; Haaf T; Gravina S; Vijg J; Tresch A
Bioinformatics; 2014 Jul; 30(13):1933-4. PubMed ID: 24618468
[TBL] [Abstract][Full Text] [Related]
2. Estimation of the methylation pattern distribution from deep sequencing data.
Lin P; Forêt S; Wilson SR; Burden CJ
BMC Bioinformatics; 2015 May; 16():145. PubMed ID: 25943746
[TBL] [Abstract][Full Text] [Related]
3. Detection of DNA Methylation by Whole-Genome Bisulfite Sequencing.
Li Q; Hermanson PJ; Springer NM
Methods Mol Biol; 2018; 1676():185-196. PubMed ID: 28986911
[TBL] [Abstract][Full Text] [Related]
4. DNAshapeR: an R/Bioconductor package for DNA shape prediction and feature encoding.
Chiu TP; Comoglio F; Zhou T; Yang L; Paro R; Rohs R
Bioinformatics; 2016 Apr; 32(8):1211-3. PubMed ID: 26668005
[TBL] [Abstract][Full Text] [Related]
5. Seq2pathway: an R/Bioconductor package for pathway analysis of next-generation sequencing data.
Wang B; Cunningham JM; Yang XH
Bioinformatics; 2015 Sep; 31(18):3043-5. PubMed ID: 25979472
[TBL] [Abstract][Full Text] [Related]
6. gemBS: high throughput processing for DNA methylation data from bisulfite sequencing.
Merkel A; Fernández-Callejo M; Casals E; Marco-Sola S; Schuyler R; Gut IG; Heath SC
Bioinformatics; 2019 Mar; 35(5):737-742. PubMed ID: 30137223
[TBL] [Abstract][Full Text] [Related]
7. HilbertCurve: an R/Bioconductor package for high-resolution visualization of genomic data.
Gu Z; Eils R; Schlesner M
Bioinformatics; 2016 Aug; 32(15):2372-4. PubMed ID: 27153599
[TBL] [Abstract][Full Text] [Related]
8. Profiling DNA Methylation Using Bisulfite Sequencing (BS-Seq).
Chen YR; Yu S; Zhong S
Methods Mol Biol; 2018; 1675():31-43. PubMed ID: 29052183
[TBL] [Abstract][Full Text] [Related]
9. MethGo: a comprehensive tool for analyzing whole-genome bisulfite sequencing data.
Liao WW; Yen MR; Ju E; Hsu FM; Lam L; Chen PY
BMC Genomics; 2015; 16 Suppl 12(Suppl 12):S11. PubMed ID: 26680022
[TBL] [Abstract][Full Text] [Related]
10. Bioinformatics Analysis of DNA Methylation Through Bisulfite Sequencing Data.
Sang F
Methods Mol Biol; 2021; 2198():441-450. PubMed ID: 32822049
[TBL] [Abstract][Full Text] [Related]
11. BSPAT: a fast online tool for DNA methylation co-occurrence pattern analysis based on high-throughput bisulfite sequencing data.
Hu K; Ting AH; Li J
BMC Bioinformatics; 2015 Jul; 16():220. PubMed ID: 26163275
[TBL] [Abstract][Full Text] [Related]
12. Whole-Genome Bisulfite Sequencing for the Analysis of Genome-Wide DNA Methylation and Hydroxymethylation Patterns at Single-Nucleotide Resolution.
Kernaleguen M; Daviaud C; Shen Y; Bonnet E; Renault V; Deleuze JF; Mauger F; Tost J
Methods Mol Biol; 2018; 1767():311-349. PubMed ID: 29524144
[TBL] [Abstract][Full Text] [Related]
13. MethyQA: a pipeline for bisulfite-treated methylation sequencing quality assessment.
Sun S; Noviski A; Yu X
BMC Bioinformatics; 2013 Aug; 14():259. PubMed ID: 23968174
[TBL] [Abstract][Full Text] [Related]
14. A trimming-and-retrieving alignment scheme for reduced representation bisulfite sequencing.
Wang X; Yu X; Zhu W; McCombie WR; Antoniou E; Powers RS; Davidson NO; Li E; Williams J
Bioinformatics; 2015 Jun; 31(12):2040-2. PubMed ID: 25681254
[TBL] [Abstract][Full Text] [Related]
15. DNA methylome profiling at single-base resolution through bisulfite sequencing of 5mC-immunoprecipitated DNA.
Jia Z; Shi Y; Zhang L; Ren Y; Wang T; Xing L; Zhang B; Gao G; Bu R
BMC Biotechnol; 2018 Feb; 18(1):7. PubMed ID: 29409498
[TBL] [Abstract][Full Text] [Related]
16. msgbsR: An R package for analysing methylation-sensitive restriction enzyme sequencing data.
Mayne BT; Leemaqz SY; Buckberry S; Rodriguez Lopez CM; Roberts CT; Bianco-Miotto T; Breen J
Sci Rep; 2018 Feb; 8(1):2190. PubMed ID: 29391490
[TBL] [Abstract][Full Text] [Related]
17. BS-Seeker2: a versatile aligning pipeline for bisulfite sequencing data.
Guo W; Fiziev P; Yan W; Cokus S; Sun X; Zhang MQ; Chen PY; Pellegrini M
BMC Genomics; 2013 Nov; 14():774. PubMed ID: 24206606
[TBL] [Abstract][Full Text] [Related]
18. A classification approach for DNA methylation profiling with bisulfite next-generation sequencing data.
Cheng L; Zhu Y
Bioinformatics; 2014 Jan; 30(2):172-9. PubMed ID: 24273245
[TBL] [Abstract][Full Text] [Related]
19. Analyzing the cancer methylome through targeted bisulfite sequencing.
Lee EJ; Luo J; Wilson JM; Shi H
Cancer Lett; 2013 Nov; 340(2):171-8. PubMed ID: 23200671
[TBL] [Abstract][Full Text] [Related]
20. Advanced methylome analysis after bisulfite deep sequencing: an example in Arabidopsis.
Dinh HQ; Dubin M; Sedlazeck FJ; Lettner N; Mittelsten Scheid O; von Haeseler A
PLoS One; 2012; 7(7):e41528. PubMed ID: 22911809
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
