These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

182 related articles for article (PubMed ID: 24623659)

  • 21. Assessment of fully automated antibody homology modeling protocols in molecular operating environment.
    Maier JK; Labute P
    Proteins; 2014 Aug; 82(8):1599-610. PubMed ID: 24715627
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Improving Loop Modeling of the Antibody Complementarity-Determining Region 3 Using Knowledge-Based Restraints.
    Finn JA; Koehler Leman J; Willis JR; Cisneros A; Crowe JE; Meiler J
    PLoS One; 2016; 11(5):e0154811. PubMed ID: 27182833
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Automated classification of antibody complementarity determining region 3 of the heavy chain (H3) loops into canonical forms and its application to protein structure prediction.
    Oliva B; Bates PA; Querol E; Avilés FX; Sternberg MJ
    J Mol Biol; 1998 Jun; 279(5):1193-210. PubMed ID: 9642095
    [TBL] [Abstract][Full Text] [Related]  

  • 24. CDR loop interactions can determine heavy and light chain pairing preferences in bispecific antibodies.
    Fernández-Quintero ML; Kroell KB; Grunewald LJ; Fischer AM; Riccabona JR; Liedl KR
    MAbs; 2022; 14(1):2024118. PubMed ID: 35090383
    [TBL] [Abstract][Full Text] [Related]  

  • 25. PyIgClassify: a database of antibody CDR structural classifications.
    Adolf-Bryfogle J; Xu Q; North B; Lehmann A; Dunbrack RL
    Nucleic Acids Res; 2015 Jan; 43(Database issue):D432-8. PubMed ID: 25392411
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Augmented Binary Substitution: Single-pass CDR germ-lining and stabilization of therapeutic antibodies.
    Townsend S; Fennell BJ; Apgar JR; Lambert M; McDonnell B; Grant J; Wade J; Franklin E; Foy N; Ní Shúilleabháin D; Fields C; Darmanin-Sheehan A; King A; Paulsen JE; Hickling TP; Tchistiakova L; Cunningham O; Finlay WJ
    Proc Natl Acad Sci U S A; 2015 Dec; 112(50):15354-9. PubMed ID: 26621728
    [TBL] [Abstract][Full Text] [Related]  

  • 27. The human combinatorial antibody library HuCAL GOLD combines diversification of all six CDRs according to the natural immune system with a novel display method for efficient selection of high-affinity antibodies.
    Rothe C; Urlinger S; Löhning C; Prassler J; Stark Y; Jäger U; Hubner B; Bardroff M; Pradel I; Boss M; Bittlingmaier R; Bataa T; Frisch C; Brocks B; Honegger A; Urban M
    J Mol Biol; 2008 Feb; 376(4):1182-200. PubMed ID: 18191144
    [TBL] [Abstract][Full Text] [Related]  

  • 28. "Superhumanized" antibodies: reduction of immunogenic potential by complementarity-determining region grafting with human germline sequences: application to an anti-CD28.
    Tan P; Mitchell DA; Buss TN; Holmes MA; Anasetti C; Foote J
    J Immunol; 2002 Jul; 169(2):1119-25. PubMed ID: 12097421
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Structural classification of CDR-H3 in antibodies.
    Shirai H; Kidera A; Nakamura H
    FEBS Lett; 1996 Dec; 399(1-2):1-8. PubMed ID: 8980108
    [TBL] [Abstract][Full Text] [Related]  

  • 30. High-resolution modeling of antibody structures by a combination of bioinformatics, expert knowledge, and molecular simulations.
    Shirai H; Ikeda K; Yamashita K; Tsuchiya Y; Sarmiento J; Liang S; Morokata T; Mizuguchi K; Higo J; Standley DM; Nakamura H
    Proteins; 2014 Aug; 82(8):1624-35. PubMed ID: 24756852
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Antibody modeling assessment.
    Almagro JC; Beavers MP; Hernandez-Guzman F; Maier J; Shaulsky J; Butenhof K; Labute P; Thorsteinson N; Kelly K; Teplyakov A; Luo J; Sweet R; Gilliland GL
    Proteins; 2011 Nov; 79(11):3050-66. PubMed ID: 21935986
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Antibody CDR loops as ensembles in solution vs. canonical clusters from X-ray structures.
    Fernández-Quintero ML; Heiss MC; Pomarici ND; Math BA; Liedl KR
    MAbs; 2020; 12(1):1744328. PubMed ID: 32264741
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Modifications to canonical structure sequence patterns: analysis for L1 and L3.
    Vargas-Madrazo E; Paz-García E
    Proteins; 2002 May; 47(2):250-4. PubMed ID: 11933071
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Sequencing and modeling of anti-DNA immunoglobulin Fv domains. Comparison with crystal structures.
    Barry MM; Mol CD; Anderson WF; Lee JS
    J Biol Chem; 1994 Feb; 269(5):3623-32. PubMed ID: 8106407
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Analysis of 5518 unique, productively rearranged human VH3-23*01 gene sequences reveals CDR-H3 length-dependent usage of the IGHD2 gene family.
    Chen L; Duan Y; Benatuil L; Stine WB
    Protein Eng Des Sel; 2017 Sep; 30(9):603-609. PubMed ID: 28472386
    [TBL] [Abstract][Full Text] [Related]  

  • 36. The diversity of H3 loops determines the antigen-binding tendencies of antibody CDR loops.
    Tsuchiya Y; Mizuguchi K
    Protein Sci; 2016 Apr; 25(4):815-25. PubMed ID: 26749247
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Structural Classification of CDR-H3 in Single-Domain V
    Kuroda D; Tsumoto K
    Methods Mol Biol; 2023; 2552():61-79. PubMed ID: 36346585
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Diverse binding site structures revealed in homology models of polyreactive immunoglobulins.
    Ramsland PA; Guddat LW; Edmundson AB; Raison RL
    J Comput Aided Mol Des; 1997 Sep; 11(5):453-61. PubMed ID: 9385549
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Conformations of the third hypervariable region in the VH domain of immunoglobulins.
    Morea V; Tramontano A; Rustici M; Chothia C; Lesk AM
    J Mol Biol; 1998 Jan; 275(2):269-94. PubMed ID: 9466909
    [TBL] [Abstract][Full Text] [Related]  

  • 40. RosettaAntibody: antibody variable region homology modeling server.
    Sircar A; Kim ET; Gray JJ
    Nucleic Acids Res; 2009 Jul; 37(Web Server issue):W474-9. PubMed ID: 19458157
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 10.