These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

263 related articles for article (PubMed ID: 24667124)

  • 1. Computational approaches to mapping allosteric pathways.
    Feher VA; Durrant JD; Van Wart AT; Amaro RE
    Curr Opin Struct Biol; 2014 Apr; 25():98-103. PubMed ID: 24667124
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Computational Tools for Allosteric Drug Discovery: Site Identification and Focus Library Design.
    Huang W; Nussinov R; Zhang J
    Methods Mol Biol; 2017; 1529():439-446. PubMed ID: 27914066
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Prediction of Protein Allosteric Signalling Pathways and Functional Residues Through Paths of Optimised Propensity.
    Wu N; Yaliraki SN; Barahona M
    J Mol Biol; 2022 Sep; 434(17):167749. PubMed ID: 35841931
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Symmetry, Rigidity, and Allosteric Signaling: From Monomeric Proteins to Molecular Machines.
    Thirumalai D; Hyeon C; Zhuravlev PI; Lorimer GH
    Chem Rev; 2019 Jun; 119(12):6788-6821. PubMed ID: 31017391
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Computational elucidation of allosteric communication in proteins for allosteric drug design.
    Ni D; Liu Y; Kong R; Yu Z; Lu S; Zhang J
    Drug Discov Today; 2022 Aug; 27(8):2226-2234. PubMed ID: 35314339
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Understanding G Protein-Coupled Receptor Allostery via Molecular Dynamics Simulations: Implications for Drug Discovery.
    Basith S; Lee Y; Choi S
    Methods Mol Biol; 2018; 1762():455-472. PubMed ID: 29594786
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Probing Allosteric Mechanism with Long-Range Rigidity Transmission Across Protein Networks.
    Sljoka A
    Methods Mol Biol; 2021; 2253():61-75. PubMed ID: 33315218
    [TBL] [Abstract][Full Text] [Related]  

  • 8. HPC Analysis of Multiple Binding Sites Communication and Allosteric Modulations in Drug Design: The HSP Case Study.
    Chiappori F; Milanesi L; Merelli I
    Curr Drug Targets; 2016; 17(14):1610-1625. PubMed ID: 26648062
    [TBL] [Abstract][Full Text] [Related]  

  • 9. The allosteric communication pathways in KIX domain of CBP.
    Palazzesi F; Barducci A; Tollinger M; Parrinello M
    Proc Natl Acad Sci U S A; 2013 Aug; 110(35):14237-42. PubMed ID: 23940332
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Mapping the intramolecular signal transduction of G-protein coupled receptors.
    Lee Y; Choi S; Hyeon C
    Proteins; 2014 May; 82(5):727-43. PubMed ID: 24166702
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Uncovering allosteric pathways in caspase-1 using Markov transient analysis and multiscale community detection.
    Amor B; Yaliraki SN; Woscholski R; Barahona M
    Mol Biosyst; 2014 Aug; 10(8):2247-58. PubMed ID: 24947802
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Weighted Implementation of Suboptimal Paths (WISP): An Optimized Algorithm and Tool for Dynamical Network Analysis.
    Van Wart AT; Durrant J; Votapka L; Amaro RE
    J Chem Theory Comput; 2014 Feb; 10(2):511-517. PubMed ID: 24803851
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Opportunities and Challenges in the Discovery of Allosteric Modulators of GPCRs.
    Bartuzi D; Kaczor AA; Matosiuk D
    Methods Mol Biol; 2018; 1705():297-319. PubMed ID: 29188568
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Allosteric pathway identification through network analysis: from molecular dynamics simulations to interactive 2D and 3D graphs.
    Allain A; Chauvot de Beauchêne I; Langenfeld F; Guarracino Y; Laine E; Tchertanov L
    Faraday Discuss; 2014; 169():303-21. PubMed ID: 25340971
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Allo-network drugs: extension of the allosteric drug concept to protein- protein interaction and signaling networks.
    Szilágyi A; Nussinov R; Csermely P
    Curr Top Med Chem; 2013; 13(1):64-77. PubMed ID: 23409766
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Computational Analysis of Residue Interaction Networks and Coevolutionary Relationships in the Hsp70 Chaperones: A Community-Hopping Model of Allosteric Regulation and Communication.
    Stetz G; Verkhivker GM
    PLoS Comput Biol; 2017 Jan; 13(1):e1005299. PubMed ID: 28095400
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Single Binding Pockets Versus Allosteric Binding.
    Song K; Zhang J
    Methods Mol Biol; 2018; 1825():295-326. PubMed ID: 30334210
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Change in allosteric network affects binding affinities of PDZ domains: analysis through perturbation response scanning.
    Gerek ZN; Ozkan SB
    PLoS Comput Biol; 2011 Oct; 7(10):e1002154. PubMed ID: 21998559
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Integration of network models and evolutionary analysis into high-throughput modeling of protein dynamics and allosteric regulation: theory, tools and applications.
    Liang Z; Verkhivker GM; Hu G
    Brief Bioinform; 2020 May; 21(3):815-835. PubMed ID: 30911759
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Coupling between global dynamics and signal transduction pathways: a mechanism of allostery for chaperonin GroEL.
    Chennubhotla C; Yang Z; Bahar I
    Mol Biosyst; 2008 Apr; 4(4):287-92. PubMed ID: 18354781
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 14.