These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
7. Prediction of models for ordered solvent in macromolecular structures by a classifier based upon resolution-independent projections of local feature data. Jones L; Tynes M; Smith P Acta Crystallogr D Struct Biol; 2019 Aug; 75(Pt 8):696-717. PubMed ID: 31373570 [TBL] [Abstract][Full Text] [Related]
8. In-house SAD phasing with surface-bound cerium ions. Vennila KN; Velmurugan D Acta Crystallogr Sect F Struct Biol Cryst Commun; 2011 Dec; 67(Pt 12):1662-5. PubMed ID: 22139192 [TBL] [Abstract][Full Text] [Related]
9. Application of DEN refinement and automated model building to a difficult case of molecular-replacement phasing: the structure of a putative succinyl-diaminopimelate desuccinylase from Corynebacterium glutamicum. Brunger AT; Das D; Deacon AM; Grant J; Terwilliger TC; Read RJ; Adams PD; Levitt M; Schröder GF Acta Crystallogr D Biol Crystallogr; 2012 Apr; 68(Pt 4):391-403. PubMed ID: 22505259 [TBL] [Abstract][Full Text] [Related]
11. Molecular dynamics simulations for water and ions in protein crystals. Hu Z; Jiang J Langmuir; 2008 Apr; 24(8):4215-23. PubMed ID: 18318554 [TBL] [Abstract][Full Text] [Related]
12. PAIREF: paired refinement also for Phenix users. Malý M; Diederichs K; Dohnálek J; Kolenko P Acta Crystallogr F Struct Biol Commun; 2021 Jul; 77(Pt 7):226-229. PubMed ID: 34196613 [TBL] [Abstract][Full Text] [Related]
13. Automated structure refinement of macromolecular assemblies from cryo-EM maps using Rosetta. Wang RY; Song Y; Barad BA; Cheng Y; Fraser JS; DiMaio F Elife; 2016 Sep; 5():. PubMed ID: 27669148 [TBL] [Abstract][Full Text] [Related]
14. Improving macromolecular atomic models at moderate resolution by automated iterative model building, statistical density modification and refinement. Terwilliger TC Acta Crystallogr D Biol Crystallogr; 2003 Jul; 59(Pt 7):1174-82. PubMed ID: 12832760 [TBL] [Abstract][Full Text] [Related]
15. Refined 1.8 A X-ray crystal structure of astacin, a zinc-endopeptidase from the crayfish Astacus astacus L. Structure determination, refinement, molecular structure and comparison with thermolysin. Gomis-Rüth FX; Stöcker W; Huber R; Zwilling R; Bode W J Mol Biol; 1993 Feb; 229(4):945-68. PubMed ID: 8445658 [TBL] [Abstract][Full Text] [Related]
16. Using SAD data in Phaser. Read RJ; McCoy AJ Acta Crystallogr D Biol Crystallogr; 2011 Apr; 67(Pt 4):338-44. PubMed ID: 21460452 [TBL] [Abstract][Full Text] [Related]