These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

278 related articles for article (PubMed ID: 24731174)

  • 1. Copy number variation detection using next generation sequencing read counts.
    Wang H; Nettleton D; Ying K
    BMC Bioinformatics; 2014 Apr; 15():109. PubMed ID: 24731174
    [TBL] [Abstract][Full Text] [Related]  

  • 2. PSE-HMM: genome-wide CNV detection from NGS data using an HMM with Position-Specific Emission probabilities.
    Malekpour SA; Pezeshk H; Sadeghi M
    BMC Bioinformatics; 2016 Nov; 18(1):30. PubMed ID: 27809781
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Noise cancellation using total variation for copy number variation detection.
    Zare F; Hosny A; Nabavi S
    BMC Bioinformatics; 2018 Oct; 19(Suppl 11):361. PubMed ID: 30343665
    [TBL] [Abstract][Full Text] [Related]  

  • 4. MGP-HMM: Detecting genome-wide CNVs using an HMM for modeling mate pair insertion sizes and read counts.
    Malekpour SA; Pezeshk H; Sadeghi M
    Math Biosci; 2016 Sep; 279():53-62. PubMed ID: 27424951
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A Local Outlier Factor-Based Detection of Copy Number Variations From NGS Data.
    Yuan X; Li J; Bai J; Xi J
    IEEE/ACM Trans Comput Biol Bioinform; 2021; 18(5):1811-1820. PubMed ID: 31880558
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Evaluation of copy number variant detection from panel-based next-generation sequencing data.
    Yao R; Yu T; Qing Y; Wang J; Shen Y
    Mol Genet Genomic Med; 2019 Jan; 7(1):e00513. PubMed ID: 30565893
    [TBL] [Abstract][Full Text] [Related]  

  • 7. CNV-CH: A Convex Hull Based Segmentation Approach to Detect Copy Number Variations (CNV) Using Next-Generation Sequencing Data.
    Sinha R; Samaddar S; De RK
    PLoS One; 2015; 10(8):e0135895. PubMed ID: 26291322
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Computational methods for detecting copy number variations in cancer genome using next generation sequencing: principles and challenges.
    Liu B; Morrison CD; Johnson CS; Trump DL; Qin M; Conroy JC; Wang J; Liu S
    Oncotarget; 2013 Nov; 4(11):1868-81. PubMed ID: 24240121
    [TBL] [Abstract][Full Text] [Related]  

  • 9. On the core segmentation algorithms of copy number variation detection tools.
    Zhang Y; Liu W; Duan J
    Brief Bioinform; 2024 Jan; 25(2):. PubMed ID: 38340093
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Algorithmic improvements for discovery of germline copy number variants in next-generation sequencing data.
    O'Fallon B; Durtschi J; Kellogg A; Lewis T; Close D; Best H
    BMC Bioinformatics; 2022 Jul; 23(1):285. PubMed ID: 35854218
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Detection Copy Number Variants from NGS with Sparse and Smooth Constraints.
    Zhang Y; Cheung YM; Xu B; Su W
    IEEE/ACM Trans Comput Biol Bioinform; 2017; 14(4):856-867. PubMed ID: 27164604
    [TBL] [Abstract][Full Text] [Related]  

  • 12. CNV-TV: a robust method to discover copy number variation from short sequencing reads.
    Duan J; Zhang JG; Deng HW; Wang YP
    BMC Bioinformatics; 2013 May; 14():150. PubMed ID: 23634703
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Detection of Significant Copy Number Variations From Multiple Samples in Next-Generation Sequencing Data.
    Yuan X; Zhang J; Yang L; Bai J; Fan P
    IEEE Trans Nanobioscience; 2018 Mar; 17(1):12-20. PubMed ID: 29570071
    [TBL] [Abstract][Full Text] [Related]  

  • 14. SeqCNV: a novel method for identification of copy number variations in targeted next-generation sequencing data.
    Chen Y; Zhao L; Wang Y; Cao M; Gelowani V; Xu M; Agrawal SA; Li Y; Daiger SP; Gibbs R; Wang F; Chen R
    BMC Bioinformatics; 2017 Mar; 18(1):147. PubMed ID: 28253855
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A remark on copy number variation detection methods.
    Li S; Dou X; Gao R; Ge X; Qian M; Wan L
    PLoS One; 2018; 13(4):e0196226. PubMed ID: 29702671
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Quantifying copy number variations using a hidden Markov model with inhomogeneous emission distributions.
    McCallum KJ; Wang JP
    Biostatistics; 2013 Jul; 14(3):600-11. PubMed ID: 23428932
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Genome-Wide Copy Number Variation Detection Using NGS: Data Analysis and Interpretation.
    Shen W; Szankasi P; Durtschi J; Kelley TW; Xu X
    Methods Mol Biol; 2019; 1908():113-124. PubMed ID: 30649724
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Genome-wide algorithm for detecting CNV associations with diseases.
    Xu Y; Peng B; Fu Y; Amos CI
    BMC Bioinformatics; 2011 Aug; 12():331. PubMed ID: 21827692
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Hidden Markov Models in Bioinformatics: SNV Inference from Next Generation Sequence.
    Bian J; Zhou X
    Methods Mol Biol; 2017; 1552():123-133. PubMed ID: 28224495
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Outlier-based identification of copy number variations using targeted resequencing in a small cohort of patients with Tetralogy of Fallot.
    Bansal V; Dorn C; Grunert M; Klaassen S; Hetzer R; Berger F; Sperling SR
    PLoS One; 2014; 9(1):e85375. PubMed ID: 24400131
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 14.