138 related articles for article (PubMed ID: 24845500)
1. FUMET: a fuzzy network module extraction technique for gene expression data.
Mahanta P; Ahmed HA; Bhattacharyya DK; Ghosh A
J Biosci; 2014 Jun; 39(3):351-64. PubMed ID: 24845500
[TBL] [Abstract][Full Text] [Related]
2. An effective method for network module extraction from microarray data.
Mahanta P; Ahmed HA; Bhattacharyya DK; Kalita JK
BMC Bioinformatics; 2012; 13 Suppl 13(Suppl 13):S4. PubMed ID: 23320896
[TBL] [Abstract][Full Text] [Related]
3. A new approach for modelling gene regulatory networks using fuzzy petri nets.
Hamed RI; Ahson SI; Parveen R
J Integr Bioinform; 2010 Feb; 7(1):. PubMed ID: 20134077
[TBL] [Abstract][Full Text] [Related]
4. Learning Differential Module Networks Across Multiple Experimental Conditions.
Erola P; Bonnet E; Michoel T
Methods Mol Biol; 2019; 1883():303-321. PubMed ID: 30547406
[TBL] [Abstract][Full Text] [Related]
5. LogicNet: probabilistic continuous logics in reconstructing gene regulatory networks.
Malekpour SA; Alizad-Rahvar AR; Sadeghi M
BMC Bioinformatics; 2020 Jul; 21(1):318. PubMed ID: 32690031
[TBL] [Abstract][Full Text] [Related]
6. Gene regulatory networks modelling using a dynamic evolutionary hybrid.
Maraziotis IA; Dragomir A; Thanos D
BMC Bioinformatics; 2010 Mar; 11():140. PubMed ID: 20298548
[TBL] [Abstract][Full Text] [Related]
7. Module network inference from a cancer gene expression data set identifies microRNA regulated modules.
Bonnet E; Tatari M; Joshi A; Michoel T; Marchal K; Berx G; Van de Peer Y
PLoS One; 2010 Apr; 5(4):e10162. PubMed ID: 20418949
[TBL] [Abstract][Full Text] [Related]
8. Gene networks reconstruction and time-series prediction from microarray data using recurrent neural fuzzy networks.
Maraziotis IA; Dragomir A; Bezerianos A
IET Syst Biol; 2007 Jan; 1(1):41-50. PubMed ID: 17370428
[TBL] [Abstract][Full Text] [Related]
9. Identification of regulatory modules in genome scale transcription regulatory networks.
Song Q; Grene R; Heath LS; Li S
BMC Syst Biol; 2017 Dec; 11(1):140. PubMed ID: 29246163
[TBL] [Abstract][Full Text] [Related]
10. CCor: A whole genome network-based similarity measure between two genes.
Hu Y; Zhao H
Biometrics; 2016 Dec; 72(4):1216-1225. PubMed ID: 26953524
[TBL] [Abstract][Full Text] [Related]
11. Gene regulatory network from microarray data of colon cancer patients using TSK-type recurrent neural fuzzy network.
Vineetha S; Chandra Shekara Bhat C; Idicula SM
Gene; 2012 Sep; 506(2):408-16. PubMed ID: 22759510
[TBL] [Abstract][Full Text] [Related]
12. A sparse and decomposed particle swarm optimization for inferring gene regulatory networks based on fuzzy cognitive maps.
Liu L; Liu J
J Bioinform Comput Biol; 2019 Aug; 17(4):1950023. PubMed ID: 31617458
[TBL] [Abstract][Full Text] [Related]
13. Crucial Gene Identification in Carotid Atherosclerosis Based on Peripheral Blood Mononuclear Cell (PBMC) Data by Weighted (Gene) Correlation Network Analysis (WGCNA).
Chen S; Yang D; Liu Z; Li F; Liu B; Chen Y; Ye W; Zheng Y
Med Sci Monit; 2020 Mar; 26():e921692. PubMed ID: 32160184
[TBL] [Abstract][Full Text] [Related]
14. Arabidopsis gene co-expression network and its functional modules.
Mao L; Van Hemert JL; Dash S; Dickerson JA
BMC Bioinformatics; 2009 Oct; 10():346. PubMed ID: 19845953
[TBL] [Abstract][Full Text] [Related]
15. Reverse engineering module networks by PSO-RNN hybrid modeling.
Zhang Y; Xuan J; de los Reyes BG; Clarke R; Ressom HW
BMC Genomics; 2009 Jul; 10 Suppl 1(Suppl 1):S15. PubMed ID: 19594874
[TBL] [Abstract][Full Text] [Related]
16. Fuzzy logic based approaches for gene regulatory network inference.
Raza K
Artif Intell Med; 2019 Jun; 97():189-203. PubMed ID: 30573378
[TBL] [Abstract][Full Text] [Related]
17. Comparison of single and module-based methods for modeling gene regulatory networks.
Hernaez M; Blatti C; Gevaert O
Bioinformatics; 2020 Jan; 36(2):558-567. PubMed ID: 31287491
[TBL] [Abstract][Full Text] [Related]
18. Network module identification-A widespread theoretical bias and best practices.
Nikolayeva I; Guitart Pla O; Schwikowski B
Methods; 2018 Jan; 132():19-25. PubMed ID: 28941788
[TBL] [Abstract][Full Text] [Related]
19. A comprehensive evaluation of module detection methods for gene expression data.
Saelens W; Cannoodt R; Saeys Y
Nat Commun; 2018 Mar; 9(1):1090. PubMed ID: 29545622
[TBL] [Abstract][Full Text] [Related]
20. Assessment of network module identification across complex diseases.
Choobdar S; Ahsen ME; Crawford J; Tomasoni M; Fang T; Lamparter D; Lin J; Hescott B; Hu X; Mercer J; Natoli T; Narayan R; ; Subramanian A; Zhang JD; Stolovitzky G; Kutalik Z; Lage K; Slonim DK; Saez-Rodriguez J; Cowen LJ; Bergmann S; Marbach D
Nat Methods; 2019 Sep; 16(9):843-852. PubMed ID: 31471613
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
