147 related articles for article (PubMed ID: 24848012)
1. EvoCor: a platform for predicting functionally related genes using phylogenetic and expression profiles.
Dittmar WJ; McIver L; Michalak P; Garner HR; Valdez G
Nucleic Acids Res; 2014 Jul; 42(Web Server issue):W72-5. PubMed ID: 24848012
[TBL] [Abstract][Full Text] [Related]
2. BPhyOG: an interactive server for genome-wide inference of bacterial phylogenies based on overlapping genes.
Luo Y; Fu C; Zhang DY; Lin K
BMC Bioinformatics; 2007 Jul; 8():266. PubMed ID: 17650344
[TBL] [Abstract][Full Text] [Related]
3. jpHMM at GOBICS: a web server to detect genomic recombinations in HIV-1.
Zhang M; Schultz AK; Calef C; Kuiken C; Leitner T; Korber B; Morgenstern B; Stanke M
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W463-5. PubMed ID: 16845050
[TBL] [Abstract][Full Text] [Related]
4. RNATOPS-W: a web server for RNA structure searches of genomes.
Wang Y; Huang Z; Wu Y; Malmberg RL; Cai L
Bioinformatics; 2009 Apr; 25(8):1080-1. PubMed ID: 19269988
[TBL] [Abstract][Full Text] [Related]
5. PhyloGene server for identification and visualization of co-evolving proteins using normalized phylogenetic profiles.
Sadreyev IR; Ji F; Cohen E; Ruvkun G; Tabach Y
Nucleic Acids Res; 2015 Jul; 43(W1):W154-9. PubMed ID: 25958392
[TBL] [Abstract][Full Text] [Related]
6. AUGUSTUS: a web server for gene finding in eukaryotes.
Stanke M; Steinkamp R; Waack S; Morgenstern B
Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W309-12. PubMed ID: 15215400
[TBL] [Abstract][Full Text] [Related]
7. GeneMark: web software for gene finding in prokaryotes, eukaryotes and viruses.
Besemer J; Borodovsky M
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W451-4. PubMed ID: 15980510
[TBL] [Abstract][Full Text] [Related]
8. GSDS 2.0: an upgraded gene feature visualization server.
Hu B; Jin J; Guo AY; Zhang H; Luo J; Gao G
Bioinformatics; 2015 Apr; 31(8):1296-7. PubMed ID: 25504850
[TBL] [Abstract][Full Text] [Related]
9. The Medicago truncatula gene expression atlas web server.
He J; Benedito VA; Wang M; Murray JD; Zhao PX; Tang Y; Udvardi MK
BMC Bioinformatics; 2009 Dec; 10():441. PubMed ID: 20028527
[TBL] [Abstract][Full Text] [Related]
10. Kerfuffle: a web tool for multi-species gene colocalization analysis.
Aboukhalil R; Fendler B; Atwal GS
BMC Bioinformatics; 2013 Jan; 14():22. PubMed ID: 23327649
[TBL] [Abstract][Full Text] [Related]
11. MethGET: web-based bioinformatics software for correlating genome-wide DNA methylation and gene expression.
Teng CS; Wu BH; Yen MR; Chen PY
BMC Genomics; 2020 May; 21(1):375. PubMed ID: 32471342
[TBL] [Abstract][Full Text] [Related]
12. GENIES: gene network inference engine based on supervised analysis.
Kotera M; Yamanishi Y; Moriya Y; Kanehisa M; Goto S
Nucleic Acids Res; 2012 Jul; 40(Web Server issue):W162-7. PubMed ID: 22610856
[TBL] [Abstract][Full Text] [Related]
13. AUGUSTUS: a web server for gene prediction in eukaryotes that allows user-defined constraints.
Stanke M; Morgenstern B
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W465-7. PubMed ID: 15980513
[TBL] [Abstract][Full Text] [Related]
14. BiC: a web server for calculating bimodality of coexpression between gene and protein networks.
Linderman GC; Patel VN; Chance MR; Bebek G
Bioinformatics; 2011 Apr; 27(8):1174-5. PubMed ID: 21345871
[TBL] [Abstract][Full Text] [Related]
15. SLAM web server for comparative gene finding and alignment.
Cawley S; Pachter L; Alexandersson M
Nucleic Acids Res; 2003 Jul; 31(13):3507-9. PubMed ID: 12824355
[TBL] [Abstract][Full Text] [Related]
16. SATCHMO-JS: a webserver for simultaneous protein multiple sequence alignment and phylogenetic tree construction.
Hagopian R; Davidson JR; Datta RS; Samad B; Jarvis GR; Sjölander K
Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W29-34. PubMed ID: 20430824
[TBL] [Abstract][Full Text] [Related]
17. INTREPID: a web server for prediction of functionally important residues by evolutionary analysis.
Sankararaman S; Kolaczkowski B; Sjölander K
Nucleic Acids Res; 2009 Jul; 37(Web Server issue):W390-5. PubMed ID: 19443452
[TBL] [Abstract][Full Text] [Related]
18. Gene finding with a hidden Markov model of genome structure and evolution.
Pedersen JS; Hein J
Bioinformatics; 2003 Jan; 19(2):219-27. PubMed ID: 12538242
[TBL] [Abstract][Full Text] [Related]
19. Ortho2ExpressMatrix--a web server that interprets cross-species gene expression data by gene family information.
Meinel T; Schweiger MR; Ludewig AH; Chenna R; Krobitsch S; Herwig R
BMC Genomics; 2011 Oct; 12():483. PubMed ID: 21970648
[TBL] [Abstract][Full Text] [Related]
20. Unsupervised genome-wide recognition of local relationship patterns.
Zamani N; Russell P; Lantz H; Hoeppner MP; Meadows JR; Vijay N; Mauceli E; di Palma F; Lindblad-Toh K; Jern P; Grabherr MG
BMC Genomics; 2013 May; 14():347. PubMed ID: 23706020
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]