BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

166 related articles for article (PubMed ID: 24959585)

  • 1. BLAT-based comparative analysis for transposable elements: BLATCAT.
    Lee S; Oh S; Kang K; Han K
    Biomed Res Int; 2014; 2014():730814. PubMed ID: 24959585
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Analysis of transposable element sequences using CENSOR and RepeatMasker.
    Huda A; Jordan IK
    Methods Mol Biol; 2009; 537():323-36. PubMed ID: 19378152
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Transposable element annotation of the rice genome.
    Juretic N; Bureau TE; Bruskiewich RM
    Bioinformatics; 2004 Jan; 20(2):155-60. PubMed ID: 14734305
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Bioinformatics and genomic analysis of transposable elements in eukaryotic genomes.
    Janicki M; Rooke R; Yang G
    Chromosome Res; 2011 Aug; 19(6):787-808. PubMed ID: 21850457
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Identification of human-specific AluS elements through comparative genomics.
    Lee J; Kim YJ; Mun S; Kim HS; Han K
    Gene; 2015 Jan; 555(2):208-16. PubMed ID: 25447892
    [TBL] [Abstract][Full Text] [Related]  

  • 6. UniPrimer: A Web-Based Primer Design Tool for Comparative Analyses of Primate Genomes.
    Batnyam N; Lee J; Lee J; Hong SB; Oh S; Han K
    Comp Funct Genomics; 2012; 2012():520732. PubMed ID: 22693428
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Primate genomes.
    Herlyn H; Zischler H
    Genome Dyn; 2006; 2():17-32. PubMed ID: 18753766
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Inferring transposons activity chronology by TRANScendence - TEs database and de-novo mining tool.
    Startek MP; Nogły J; Gromadka A; Grzebelus D; Gambin A
    BMC Bioinformatics; 2017 Oct; 18(Suppl 12):422. PubMed ID: 29072141
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Role of transposable elements in genomic rearrangement, evolution, gene regulation and epigenetics in primates.
    Lee HE; Ayarpadikannan S; Kim HS
    Genes Genet Syst; 2015; 90(5):245-57. PubMed ID: 26781081
    [TBL] [Abstract][Full Text] [Related]  

  • 10. VisualTE: a graphical interface for transposable element analysis at the genomic scale.
    Tempel S; Talla E
    BMC Genomics; 2015 Feb; 16(1):139. PubMed ID: 25881276
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Rapid detection and curation of conserved DNA via enhanced-BLAT and EvoPrinterHD analysis.
    Yavatkar AS; Lin Y; Ross J; Fann Y; Brody T; Odenwald WF
    BMC Genomics; 2008 Feb; 9():106. PubMed ID: 18307801
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Characterization of a novel class of interspersed LTR elements in primate genomes: structure, genomic distribution, and evolution.
    Liao D; Pavelitz T; Weiner AM
    J Mol Evol; 1998 Jun; 46(6):649-60. PubMed ID: 9608047
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Computational methods for the analysis of primate mobile elements.
    Cordaux R; Sen SK; Konkel MK; Batzer MA
    Methods Mol Biol; 2010; 628():137-51. PubMed ID: 20238080
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Estimating overannotation across prokaryotic genomes using BLAST+, UBLAST, LAST and BLAT.
    Moreno-Hagelsieb G; Hudy-Yuffa B
    BMC Res Notes; 2014 Sep; 7():651. PubMed ID: 25228073
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Comparative genomic analysis of the 3' UTR of human MDM2 identifies multiple transposable elements, an RLP24 pseudogene and a cluster of novel repeat sequences that arose during primate evolution.
    Browning JWL; Rambo TME; McKay BC
    Gene; 2020 May; 741():144557. PubMed ID: 32171824
    [TBL] [Abstract][Full Text] [Related]  

  • 16. TEnest 2.0: computational annotation and visualization of nested transposable elements.
    Kronmiller BA; Wise RP
    Methods Mol Biol; 2013; 1057():305-19. PubMed ID: 23918438
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Impact of polymorphic transposable elements on transcription in lymphoblastoid cell lines from public data.
    Spirito G; Mangoni D; Sanges R; Gustincich S
    BMC Bioinformatics; 2019 Nov; 20(Suppl 9):495. PubMed ID: 31757210
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Novel Bioinformatics Approach Identifies Transcriptional Profiles of Lineage-Specific Transposable Elements at Distinct Loci in the Human Dorsolateral Prefrontal Cortex.
    Guffanti G; Bartlett A; Klengel T; Klengel C; Hunter R; Glinsky G; Macciardi F
    Mol Biol Evol; 2018 Oct; 35(10):2435-2453. PubMed ID: 30053206
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Conserved expression of transposon-derived non-coding transcripts in primate stem cells.
    Ramsay L; Marchetto MC; Caron M; Chen SH; Busche S; Kwan T; Pastinen T; Gage FH; Bourque G
    BMC Genomics; 2017 Feb; 18(1):214. PubMed ID: 28245871
    [TBL] [Abstract][Full Text] [Related]  

  • 20. The majority of primate-specific regulatory sequences are derived from transposable elements.
    Jacques PÉ; Jeyakani J; Bourque G
    PLoS Genet; 2013 May; 9(5):e1003504. PubMed ID: 23675311
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.