These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

158 related articles for article (PubMed ID: 24966351)

  • 1. Structural basis of the methylation specificity of R.DpnI.
    Mierzejewska K; Siwek W; Czapinska H; Kaus-Drobek M; Radlinska M; Skowronek K; Bujnicki JM; Dadlez M; Bochtler M
    Nucleic Acids Res; 2014 Jul; 42(13):8745-54. PubMed ID: 24966351
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Crystal structure and mechanism of action of the N6-methyladenine-dependent type IIM restriction endonuclease R.DpnI.
    Siwek W; Czapinska H; Bochtler M; Bujnicki JM; Skowronek K
    Nucleic Acids Res; 2012 Aug; 40(15):7563-72. PubMed ID: 22610857
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Methylation-targeted specificity of the DNA binding proteins R.DpnI and MeCP2 studied by molecular dynamics simulations.
    Shanak S; Ulucan O; Helms V
    J Mol Model; 2017 May; 23(5):152. PubMed ID: 28374217
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Hydration properties of natural and synthetic DNA sequences with methylated adenine or cytosine bases in the R.DpnI target and BDNF promoter studied by molecular dynamics simulations.
    Shanak S; Helms V
    J Chem Phys; 2014 Dec; 141(22):22D512. PubMed ID: 25494783
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Site-directed mutagenesis using uracil-containing double-stranded DNA templates and DpnI digestion.
    Li F; Liu SL; Mullins JI
    Biotechniques; 1999 Oct; 27(4):734-8. PubMed ID: 10524315
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The recognition domain of the BpuJI restriction endonuclease in complex with cognate DNA at 1.3-A resolution.
    Sukackaite R; Grazulis S; Bochtler M; Siksnys V
    J Mol Biol; 2008 May; 378(5):1084-93. PubMed ID: 18433771
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Structural mechanisms for the 5'-CCWGG sequence recognition by the N- and C-terminal domains of EcoRII.
    Golovenko D; Manakova E; Tamulaitiene G; Grazulis S; Siksnys V
    Nucleic Acids Res; 2009 Oct; 37(19):6613-24. PubMed ID: 19729506
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Structural mechanisms of the degenerate sequence recognition by Bse634I restriction endonuclease.
    Manakova E; Grazulis S; Zaremba M; Tamulaitiene G; Golovenko D; Siksnys V
    Nucleic Acids Res; 2012 Aug; 40(14):6741-51. PubMed ID: 22495930
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A unique methylation pattern by a type I HsdM methyltransferase prepares for DpnI rare cutting sites in the Pseudomonas aeruginosa PAO1 genome.
    Fischer S; Römling U; Tümmler B
    FEMS Microbiol Lett; 2019 Mar; 366(5):. PubMed ID: 30865771
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Structural analysis of the heterodimeric type IIS restriction endonuclease R.BspD6I acting as a complex between a monomeric site-specific nickase and a catalytic subunit.
    Kachalova GS; Rogulin EA; Yunusova AK; Artyukh RI; Perevyazova TA; Matvienko NI; Zheleznaya LA; Bartunik HD
    J Mol Biol; 2008 Dec; 384(2):489-502. PubMed ID: 18835275
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Characterization and crystal structure of the type IIG restriction endonuclease RM.BpuSI.
    Shen BW; Xu D; Chan SH; Zheng Y; Zhu Z; Xu SY; Stoddard BL
    Nucleic Acids Res; 2011 Oct; 39(18):8223-36. PubMed ID: 21724614
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Functional analysis of MmeI from methanol utilizer Methylophilus methylotrophus, a subtype IIC restriction-modification enzyme related to type I enzymes.
    Nakonieczna J; Kaczorowski T; Obarska-Kosinska A; Bujnicki JM
    Appl Environ Microbiol; 2009 Jan; 75(1):212-23. PubMed ID: 18997032
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Characterization of eukaryotic DNA N(6)-methyladenine by a highly sensitive restriction enzyme-assisted sequencing.
    Luo GZ; Wang F; Weng X; Chen K; Hao Z; Yu M; Deng X; Liu J; He C
    Nat Commun; 2016 Apr; 7():11301. PubMed ID: 27079427
    [TBL] [Abstract][Full Text] [Related]  

  • 14. How PspGI, catalytic domain of EcoRII and Ecl18kI acquire specificities for different DNA targets.
    Tamulaitis G; Zaremba M; Szczepanowski RH; Bochtler M; Siksnys V
    Nucleic Acids Res; 2008 Nov; 36(19):6101-8. PubMed ID: 18820295
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Restriction endonuclease MvaI is a monomer that recognizes its target sequence asymmetrically.
    Kaus-Drobek M; Czapinska H; Sokołowska M; Tamulaitis G; Szczepanowski RH; Urbanke C; Siksnys V; Bochtler M
    Nucleic Acids Res; 2007; 35(6):2035-46. PubMed ID: 17344322
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Site-directed mutagenesis of double-stranded DNA by the polymerase chain reaction.
    Weiner MP; Costa GL; Schoettlin W; Cline J; Mathur E; Bauer JC
    Gene; 1994 Dec; 151(1-2):119-23. PubMed ID: 7828859
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Changing the target base specificity of the EcoRV DNA methyltransferase by rational de novo protein-design.
    Roth M; Jeltsch A
    Nucleic Acids Res; 2001 Aug; 29(15):3137-44. PubMed ID: 11470870
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Non-cognate enzyme-DNA complex: structural and kinetic analysis of EcoRV endonuclease bound to the EcoRI recognition site GAATTC.
    Hiller DA; Rodriguez AM; Perona JJ
    J Mol Biol; 2005 Nov; 354(1):121-36. PubMed ID: 16236314
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Novel subtype of type IIs restriction enzymes. BfiI endonuclease exhibits similarities to the EDTA-resistant nuclease Nuc of Salmonella typhimurium.
    Sapranauskas R; Sasnauskas G; Lagunavicius A; Vilkaitis G; Lubys A; Siksnys V
    J Biol Chem; 2000 Oct; 275(40):30878-85. PubMed ID: 10880511
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Asp34 of PvuII endonuclease is directly involved in DNA minor groove recognition and indirectly involved in catalysis.
    Horton JR; Nastri HG; Riggs PD; Cheng X
    J Mol Biol; 1998 Dec; 284(5):1491-504. PubMed ID: 9878366
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.