These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

204 related articles for article (PubMed ID: 24979799)

  • 1. Invisible RNA state dynamically couples distant motifs.
    Lee J; Dethoff EA; Al-Hashimi HM
    Proc Natl Acad Sci U S A; 2014 Jul; 111(26):9485-90. PubMed ID: 24979799
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Characterizing RNA Excited States Using NMR Relaxation Dispersion.
    Xue Y; Kellogg D; Kimsey IJ; Sathyamoorthy B; Stein ZW; McBrairty M; Al-Hashimi HM
    Methods Enzymol; 2015; 558():39-73. PubMed ID: 26068737
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Characterizing complex dynamics in the transactivation response element apical loop and motional correlations with the bulge by NMR, molecular dynamics, and mutagenesis.
    Dethoff EA; Hansen AL; Musselman C; Watt ED; Andricioaei I; Al-Hashimi HM
    Biophys J; 2008 Oct; 95(8):3906-15. PubMed ID: 18621815
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Shortening the HIV-1 TAR RNA Bulge by a Single Nucleotide Preserves Motional Modes over a Broad Range of Time Scales.
    Merriman DK; Xue Y; Yang S; Kimsey IJ; Shakya A; Clay M; Al-Hashimi HM
    Biochemistry; 2016 Aug; 55(32):4445-56. PubMed ID: 27232530
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Liquid-crystal NMR structure of HIV TAR RNA bound to its SELEX RNA aptamer reveals the origins of the high stability of the complex.
    Van Melckebeke H; Devany M; Di Primo C; Beaurain F; Toulmé JJ; Bryce DL; Boisbouvier J
    Proc Natl Acad Sci U S A; 2008 Jul; 105(27):9210-5. PubMed ID: 18607001
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Visualizing transient low-populated structures of RNA.
    Dethoff EA; Petzold K; Chugh J; Casiano-Negroni A; Al-Hashimi HM
    Nature; 2012 Nov; 491(7426):724-8. PubMed ID: 23041928
    [TBL] [Abstract][Full Text] [Related]  

  • 7. The human immunodeficiency virus type 1 TAR RNA upper stem-loop plays distinct roles in reverse transcription and RNA packaging.
    Harrich D; Hooker CW; Parry E
    J Virol; 2000 Jun; 74(12):5639-46. PubMed ID: 10823871
    [TBL] [Abstract][Full Text] [Related]  

  • 8. NMR characterization of a kissing complex formed between the TAR RNA element of HIV-1 and a DNA aptamer.
    Collin D; van Heijenoort C; Boiziau C; Toulmé JJ; Guittet E
    Nucleic Acids Res; 2000 Sep; 28(17):3386-91. PubMed ID: 10954609
    [TBL] [Abstract][Full Text] [Related]  

  • 9. NMR structure of stem-loop SL2 of the HIV-1 psi RNA packaging signal reveals a novel A-U-A base-triple platform.
    Amarasinghe GK; De Guzman RN; Turner RB; Summers MF
    J Mol Biol; 2000 May; 299(1):145-56. PubMed ID: 10860728
    [TBL] [Abstract][Full Text] [Related]  

  • 10. HIV-1 nucleocapsid protein activates transient melting of least stable parts of the secondary structure of TAR and its complementary sequence.
    Bernacchi S; Stoylov S; Piémont E; Ficheux D; Roques BP; Darlix JL; Mély Y
    J Mol Biol; 2002 Mar; 317(3):385-99. PubMed ID: 11922672
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Simultaneous recognition of HIV-1 TAR RNA bulge and loop sequences by cyclic peptide mimics of Tat protein.
    Davidson A; Leeper TC; Athanassiou Z; Patora-Komisarska K; Karn J; Robinson JA; Varani G
    Proc Natl Acad Sci U S A; 2009 Jul; 106(29):11931-6. PubMed ID: 19584251
    [TBL] [Abstract][Full Text] [Related]  

  • 12. In vitro selection identifies key determinants for loop-loop interactions: RNA aptamers selective for the TAR RNA element of HIV-1.
    Ducongé F; Toulmé JJ
    RNA; 1999 Dec; 5(12):1605-14. PubMed ID: 10606271
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Base flexibility in HIV-2 TAR RNA mapped by solution (15)N, (13)C NMR relaxation.
    Dayie KT; Brodsky AS; Williamson JR
    J Mol Biol; 2002 Mar; 317(2):263-78. PubMed ID: 11902842
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Resolving sugar puckers in RNA excited states exposes slow modes of repuckering dynamics.
    Clay MC; Ganser LR; Merriman DK; Al-Hashimi HM
    Nucleic Acids Res; 2017 Aug; 45(14):e134. PubMed ID: 28609788
    [TBL] [Abstract][Full Text] [Related]  

  • 15. iRED analysis of TAR RNA reveals motional coupling, long-range correlations, and a dynamical hinge.
    Musselman C; Al-Hashimi HM; Andricioaei I
    Biophys J; 2007 Jul; 93(2):411-22. PubMed ID: 17449677
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Argininamide binding arrests global motions in HIV-1 TAR RNA: comparison with Mg2+-induced conformational stabilization.
    Pitt SW; Majumdar A; Serganov A; Patel DJ; Al-Hashimi HM
    J Mol Biol; 2004 Apr; 338(1):7-16. PubMed ID: 15050819
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Mutations in the TAR hairpin affect the equilibrium between alternative conformations of the HIV-1 leader RNA.
    Huthoff H; Berkhout B
    Nucleic Acids Res; 2001 Jun; 29(12):2594-600. PubMed ID: 11410668
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Structural features of an RNA containing the CUGGGA loop of the human immunodeficiency virus type 1 trans-activation response element.
    Colvin RA; White SW; Garcia-Blanco MA; Hoffman DW
    Biochemistry; 1993 Feb; 32(4):1105-12. PubMed ID: 8424939
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Tat functions to stimulate the elongation properties of transcription complexes paused by the duplicated TAR RNA element of human immunodeficiency virus 2.
    García-Martínez LF; Mavankal G; Peters P; Wu-Baer F; Gaynor RB
    J Mol Biol; 1995 Dec; 254(3):350-63. PubMed ID: 7490754
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Structural features of the trans-activation response RNA element of equine infectious anemia virus.
    Hoffman DW; Colvin RA; Garcia-Blanco MA; White SW
    Biochemistry; 1993 Feb; 32(4):1096-104. PubMed ID: 8381023
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.