213 related articles for article (PubMed ID: 24987095)
1. Conservation of transcription start sites within genes across a bacterial genus.
Shao W; Price MN; Deutschbauer AM; Romine MF; Arkin AP
mBio; 2014 Jul; 5(4):e01398-14. PubMed ID: 24987095
[TBL] [Abstract][Full Text] [Related]
2. Genome-wide identification of transcriptional start sites in the haloarchaeon Haloferax volcanii based on differential RNA-Seq (dRNA-Seq).
Babski J; Haas KA; Näther-Schindler D; Pfeiffer F; Förstner KU; Hammelmann M; Hilker R; Becker A; Sharma CM; Marchfelder A; Soppa J
BMC Genomics; 2016 Aug; 17(1):629. PubMed ID: 27519343
[TBL] [Abstract][Full Text] [Related]
3. Genome-wide prediction and validation of sigma70 promoters in Lactobacillus plantarum WCFS1.
Todt TJ; Wels M; Bongers RS; Siezen RS; van Hijum SA; Kleerebezem M
PLoS One; 2012; 7(9):e45097. PubMed ID: 23028780
[TBL] [Abstract][Full Text] [Related]
4. Genome-wide identification of transcription start sites, promoters and transcription factor binding sites in E. coli.
Mendoza-Vargas A; Olvera L; Olvera M; Grande R; Vega-Alvarado L; Taboada B; Jimenez-Jacinto V; Salgado H; Juárez K; Contreras-Moreira B; Huerta AM; Collado-Vides J; Morett E
PLoS One; 2009 Oct; 4(10):e7526. PubMed ID: 19838305
[TBL] [Abstract][Full Text] [Related]
5. Transcriptome analysis of thermophilic methylotrophic Bacillus methanolicus MGA3 using RNA-sequencing provides detailed insights into its previously uncharted transcriptional landscape.
Irla M; Neshat A; Brautaset T; Rückert C; Kalinowski J; Wendisch VF
BMC Genomics; 2015 Feb; 16(1):73. PubMed ID: 25758049
[TBL] [Abstract][Full Text] [Related]
6. Comparative analysis of regulatory elements between Escherichia coli and Klebsiella pneumoniae by genome-wide transcription start site profiling.
Kim D; Hong JS; Qiu Y; Nagarajan H; Seo JH; Cho BK; Tsai SF; Palsson BØ
PLoS Genet; 2012; 8(8):e1002867. PubMed ID: 22912590
[TBL] [Abstract][Full Text] [Related]
7. Motif composition, conservation and condition-specificity of single and alternative transcription start sites in the Drosophila genome.
Rach EA; Yuan HY; Majoros WH; Tomancak P; Ohler U
Genome Biol; 2009; 10(7):R73. PubMed ID: 19589141
[TBL] [Abstract][Full Text] [Related]
8. Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene regulation.
Čuklina J; Hahn J; Imakaev M; Omasits U; Förstner KU; Ljubimov N; Goebel M; Pessi G; Fischer HM; Ahrens CH; Gelfand MS; Evguenieva-Hackenberg E
BMC Genomics; 2016 Apr; 17():302. PubMed ID: 27107716
[TBL] [Abstract][Full Text] [Related]
9. Genome-wide determination of transcription start sites reveals new insights into promoter structures in the actinomycete Corynebacterium glutamicum.
Albersmeier A; Pfeifer-Sancar K; Rückert C; Kalinowski J
J Biotechnol; 2017 Sep; 257():99-109. PubMed ID: 28412515
[TBL] [Abstract][Full Text] [Related]
10. Genome-Wide Analysis of the Transcription Start Sites and Promoter Motifs of Phytoplasmas.
Nijo T; Neriya Y; Koinuma H; Iwabuchi N; Kitazawa Y; Tanno K; Okano Y; Maejima K; Yamaji Y; Oshima K; Namba S
DNA Cell Biol; 2017 Dec; 36(12):1081-1092. PubMed ID: 29039971
[TBL] [Abstract][Full Text] [Related]
11. Genome-wide mapping of transcription start sites yields novel insights into the primary transcriptome of Pseudomonas putida.
D'Arrigo I; Bojanovič K; Yang X; Holm Rau M; Long KS
Environ Microbiol; 2016 Oct; 18(10):3466-3481. PubMed ID: 27111755
[TBL] [Abstract][Full Text] [Related]
12. Antisense transcription is pervasive but rarely conserved in enteric bacteria.
Raghavan R; Sloan DB; Ochman H
mBio; 2012; 3(4):. PubMed ID: 22872780
[TBL] [Abstract][Full Text] [Related]
13. Genome wide transcription start sites analysis of Xanthomonas campestris pv. campestris B100 with insights into the gum gene cluster directing the biosynthesis of the exopolysaccharide xanthan.
Alkhateeb RS; Vorhölter FJ; Rückert C; Mentz A; Wibberg D; Hublik G; Niehaus K; Pühler A
J Biotechnol; 2016 May; 225():18-28. PubMed ID: 26975844
[TBL] [Abstract][Full Text] [Related]
14. Identification of Arabidopsis genic and non-genic promoters by paired-end sequencing of TSS tags.
Tokizawa M; Kusunoki K; Koyama H; Kurotani A; Sakurai T; Suzuki Y; Sakamoto T; Kurata T; Yamamoto YY
Plant J; 2017 May; 90(3):587-605. PubMed ID: 28214361
[TBL] [Abstract][Full Text] [Related]
15. Unprecedented high-resolution view of bacterial operon architecture revealed by RNA sequencing.
Conway T; Creecy JP; Maddox SM; Grissom JE; Conkle TL; Shadid TM; Teramoto J; San Miguel P; Shimada T; Ishihama A; Mori H; Wanner BL
mBio; 2014 Jul; 5(4):e01442-14. PubMed ID: 25006232
[TBL] [Abstract][Full Text] [Related]
16. Genome-wide RNA pol II initiation and pausing in neural progenitors of the rat.
Scheidegger A; Dunn CJ; Samarakkody A; Koney NK; Perley D; Saha RN; Nechaev S
BMC Genomics; 2019 Jun; 20(1):477. PubMed ID: 31185909
[TBL] [Abstract][Full Text] [Related]
17. Genome-wide identification and characterization of transcription start sites and promoters in the tunicate Ciona intestinalis.
Yokomori R; Shimai K; Nishitsuji K; Suzuki Y; Kusakabe TG; Nakai K
Genome Res; 2016 Jan; 26(1):140-50. PubMed ID: 26668163
[TBL] [Abstract][Full Text] [Related]
18. Structure of a Core Promoter in Bifidobacterium longum NCC2705.
Kozakai T; Izumi A; Horigome A; Odamaki T; Xiao JZ; Nomura I; Suzuki T
J Bacteriol; 2020 Mar; 202(7):. PubMed ID: 31964699
[TBL] [Abstract][Full Text] [Related]
19. Transcriptome sequencing of microglial cells stimulated with TLR3 and TLR4 ligands.
Das A; Chai JC; Kim SH; Lee YS; Park KS; Jung KH; Chai YG
BMC Genomics; 2015 Jul; 16(1):517. PubMed ID: 26159724
[TBL] [Abstract][Full Text] [Related]
20. The cis-regulatory map of Shewanella genomes.
Liu J; Xu X; Stormo GD
Nucleic Acids Res; 2008 Sep; 36(16):5376-90. PubMed ID: 18701645
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
