These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

170 related articles for article (PubMed ID: 24991975)

  • 1. sc-PDB-Frag: a database of protein-ligand interaction patterns for Bioisosteric replacements.
    Desaphy J; Rognan D
    J Chem Inf Model; 2014 Jul; 54(7):1908-18. PubMed ID: 24991975
    [TBL] [Abstract][Full Text] [Related]  

  • 2. sc-PDB: an annotated database of druggable binding sites from the Protein Data Bank.
    Kellenberger E; Muller P; Schalon C; Bret G; Foata N; Rognan D
    J Chem Inf Model; 2006; 46(2):717-27. PubMed ID: 16563002
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Encoding protein-ligand interaction patterns in fingerprints and graphs.
    Desaphy J; Raimbaud E; Ducrot P; Rognan D
    J Chem Inf Model; 2013 Mar; 53(3):623-37. PubMed ID: 23432543
    [TBL] [Abstract][Full Text] [Related]  

  • 4. sc-PDB: a database for identifying variations and multiplicity of 'druggable' binding sites in proteins.
    Meslamani J; Rognan D; Kellenberger E
    Bioinformatics; 2011 May; 27(9):1324-6. PubMed ID: 21398668
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Bioisosteric Replacements Extracted from High-Quality Structures in the Protein Databank.
    Seddon MP; Cosgrove DA; Gillet VJ
    ChemMedChem; 2018 Mar; 13(6):607-613. PubMed ID: 29314719
    [TBL] [Abstract][Full Text] [Related]  

  • 6. sc-PDB: a 3D-database of ligandable binding sites--10 years on.
    Desaphy J; Bret G; Rognan D; Kellenberger E
    Nucleic Acids Res; 2015 Jan; 43(Database issue):D399-404. PubMed ID: 25300483
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Computational methodologies for compound database searching that utilize experimental protein-ligand interaction information.
    Tan L; Batista J; Bajorath J
    Chem Biol Drug Des; 2010 Sep; 76(3):191-200. PubMed ID: 20636330
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Virtual screening and scaffold hopping based on GRID molecular interaction fields.
    Ahlström MM; Ridderström M; Luthman K; Zamora I
    J Chem Inf Model; 2005; 45(5):1313-23. PubMed ID: 16180908
    [TBL] [Abstract][Full Text] [Related]  

  • 9. SHOP: a method for structure-based fragment and scaffold hopping.
    Fontaine F; Cross S; Plasencia G; Pastor M; Zamora I
    ChemMedChem; 2009 Mar; 4(3):427-39. PubMed ID: 19152365
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Conserved core substructures in the overlay of protein-ligand complexes.
    Finzel BC; Akavaram R; Ragipindi A; Van Voorst JR; Cahn M; Davis ME; Pokross ME; Sheriff S; Baldwin ET
    J Chem Inf Model; 2011 Aug; 51(8):1931-41. PubMed ID: 21736376
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Predicting target-ligand interactions using protein ligand-binding site and ligand substructures.
    Wang C; Liu J; Luo F; Deng Z; Hu QN
    BMC Syst Biol; 2015; 9 Suppl 1(Suppl 1):S2. PubMed ID: 25707321
    [TBL] [Abstract][Full Text] [Related]  

  • 12. PDB-Ligand: a ligand database based on PDB for the automated and customized classification of ligand-binding structures.
    Shin JM; Cho DH
    Nucleic Acids Res; 2005 Jan; 33(Database issue):D238-41. PubMed ID: 15608186
    [TBL] [Abstract][Full Text] [Related]  

  • 13. SCOWLP: a web-based database for detailed characterization and visualization of protein interfaces.
    Teyra J; Doms A; Schroeder M; Pisabarro MT
    BMC Bioinformatics; 2006 Mar; 7():104. PubMed ID: 16512892
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Screening of drug target proteins by 2D ligand matching approach.
    Feng J; Guo H; Wang J; Lu T
    Chem Biol Drug Des; 2014 Feb; 83(2):174-82. PubMed ID: 24034065
    [TBL] [Abstract][Full Text] [Related]  

  • 15. eF-seek: prediction of the functional sites of proteins by searching for similar electrostatic potential and molecular surface shape.
    Kinoshita K; Murakami Y; Nakamura H
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W398-402. PubMed ID: 17567616
    [TBL] [Abstract][Full Text] [Related]  

  • 16. KLIFS: a knowledge-based structural database to navigate kinase-ligand interaction space.
    van Linden OP; Kooistra AJ; Leurs R; de Esch IJ; de Graaf C
    J Med Chem; 2014 Jan; 57(2):249-77. PubMed ID: 23941661
    [TBL] [Abstract][Full Text] [Related]  

  • 17. DrugPred: a structure-based approach to predict protein druggability developed using an extensive nonredundant data set.
    Krasowski A; Muthas D; Sarkar A; Schmitt S; Brenk R
    J Chem Inf Model; 2011 Nov; 51(11):2829-42. PubMed ID: 21995295
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Protein ligand interaction database (PLID).
    Reddy AS; Amarnath HS; Bapi RS; Sastry GM; Sastry GN
    Comput Biol Chem; 2008 Oct; 32(5):387-90. PubMed ID: 18514578
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Domain-based small molecule binding site annotation.
    Snyder KA; Feldman HJ; Dumontier M; Salama JJ; Hogue CW
    BMC Bioinformatics; 2006 Mar; 7():152. PubMed ID: 16545112
    [TBL] [Abstract][Full Text] [Related]  

  • 20. The ConSurf-HSSP database: the mapping of evolutionary conservation among homologs onto PDB structures.
    Glaser F; Rosenberg Y; Kessel A; Pupko T; Ben-Tal N
    Proteins; 2005 Feb; 58(3):610-7. PubMed ID: 15614759
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.