BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

183 related articles for article (PubMed ID: 25002512)

  • 1. Modulation of frustration in folding by sequence permutation.
    Nobrega RP; Arora K; Kathuria SV; Graceffa R; Barrea RA; Guo L; Chakravarthy S; Bilsel O; Irving TC; Brooks CL; Matthews CR
    Proc Natl Acad Sci U S A; 2014 Jul; 111(29):10562-7. PubMed ID: 25002512
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Topological frustration in beta alpha-repeat proteins: sequence diversity modulates the conserved folding mechanisms of alpha/beta/alpha sandwich proteins.
    Hills RD; Kathuria SV; Wallace LA; Day IJ; Brooks CL; Matthews CR
    J Mol Biol; 2010 Apr; 398(2):332-50. PubMed ID: 20226790
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Subdomain competition, cooperativity, and topological frustration in the folding of CheY.
    Hills RD; Brooks CL
    J Mol Biol; 2008 Oct; 382(2):485-95. PubMed ID: 18644380
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Kinetic traps in the folding of beta alpha-repeat proteins: CheY initially misfolds before accessing the native conformation.
    Kathuria SV; Day IJ; Wallace LA; Matthews CR
    J Mol Biol; 2008 Oct; 382(2):467-84. PubMed ID: 18619461
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Structure of the transition state for folding of the 129 aa protein CheY resembles that of a smaller protein, CI-2.
    López-Hernández E; Serrano L
    Fold Des; 1996; 1(1):43-55. PubMed ID: 9079363
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A tightly packed hydrophobic cluster directs the formation of an off-pathway sub-millisecond folding intermediate in the alpha subunit of tryptophan synthase, a TIM barrel protein.
    Wu Y; Vadrevu R; Kathuria S; Yang X; Matthews CR
    J Mol Biol; 2007 Mar; 366(5):1624-38. PubMed ID: 17222865
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Kinetic characterization of the chemotactic protein from Escherichia coli, CheY. Kinetic analysis of the inverse hydrophobic effect.
    Muñoz V; Lopez EM; Jager M; Serrano L
    Biochemistry; 1994 May; 33(19):5858-66. PubMed ID: 8180214
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Clusters of branched aliphatic side chains serve as cores of stability in the native state of the HisF TIM barrel protein.
    Gangadhara BN; Laine JM; Kathuria SV; Massi F; Matthews CR
    J Mol Biol; 2013 Mar; 425(6):1065-81. PubMed ID: 23333740
    [TBL] [Abstract][Full Text] [Related]  

  • 9. NMR and SAXS characterization of the denatured state of the chemotactic protein CheY: implications for protein folding initiation.
    Garcia P; Serrano L; Durand D; Rico M; Bruix M
    Protein Sci; 2001 Jun; 10(6):1100-12. PubMed ID: 11369848
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Favourable native-like helical local interactions can accelerate protein folding.
    Viguera AR; Villegas V; Avilés FX; Serrano L
    Fold Des; 1997; 2(1):23-33. PubMed ID: 9080196
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Clusters of isoleucine, leucine, and valine side chains define cores of stability in high-energy states of globular proteins: Sequence determinants of structure and stability.
    Kathuria SV; Chan YH; Nobrega RP; Özen A; Matthews CR
    Protein Sci; 2016 Mar; 25(3):662-75. PubMed ID: 26660714
    [TBL] [Abstract][Full Text] [Related]  

  • 12. An NMR view of the folding process of a CheY mutant at the residue level.
    Garcia P; Serrano L; Rico M; Bruix M
    Structure; 2002 Sep; 10(9):1173-1185. PubMed ID: 12220489
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Topological and energetic factors: what determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins.
    Clementi C; Nymeyer H; Onuchic JN
    J Mol Biol; 2000 May; 298(5):937-53. PubMed ID: 10801360
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Frustration and folding of a TIM barrel protein.
    Halloran KT; Wang Y; Arora K; Chakravarthy S; Irving TC; Bilsel O; Brooks CL; Matthews CR
    Proc Natl Acad Sci U S A; 2019 Aug; 116(33):16378-16383. PubMed ID: 31346089
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Amide hydrogen exchange and internal dynamics in the chemotactic protein CheY from Escherichia coli.
    Lacroix E; Bruix M; López-Hernández E; Serrano L; Rico M
    J Mol Biol; 1997 Aug; 271(3):472-87. PubMed ID: 9268672
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Folding thermodynamics and kinetics of the leucine-rich repeat domain of the virulence factor Internalin B.
    Courtemanche N; Barrick D
    Protein Sci; 2008 Jan; 17(1):43-53. PubMed ID: 18156467
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Analysis of the effect of local interactions on protein stability.
    Muñoz V; Cronet P; López-Hernández E; Serrano L
    Fold Des; 1996; 1(3):167-78. PubMed ID: 9079379
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Structure and dynamics of a CheY-binding domain of the chemotaxis kinase CheA determined by nuclear magnetic resonance spectroscopy.
    McEvoy MM; Muhandiram DR; Kay LE; Dahlquist FW
    Biochemistry; 1996 May; 35(18):5633-40. PubMed ID: 8639521
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Protein topology affects the appearance of intermediates during the folding of proteins with a flavodoxin-like fold.
    Bollen YJ; van Mierlo CP
    Biophys Chem; 2005 Apr; 114(2-3):181-9. PubMed ID: 15829351
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Microsecond subdomain folding in dihydrofolate reductase.
    Arai M; Iwakura M; Matthews CR; Bilsel O
    J Mol Biol; 2011 Jul; 410(2):329-42. PubMed ID: 21554889
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.