BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

107 related articles for article (PubMed ID: 25012181)

  • 1. Fast spatial ancestry via flexible allele frequency surfaces.
    Rañola JM; Novembre J; Lange K
    Bioinformatics; 2014 Oct; 30(20):2915-22. PubMed ID: 25012181
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Novel probabilistic models of spatial genetic ancestry with applications to stratification correction in genome-wide association studies.
    Bhaskar A; Javanmard A; Courtade TA; Tse D
    Bioinformatics; 2017 Mar; 33(6):879-885. PubMed ID: 28025204
    [TBL] [Abstract][Full Text] [Related]  

  • 3. ASAFE: ancestry-specific allele frequency estimation.
    Zhang QS; Browning BL; Browning SR
    Bioinformatics; 2016 Jul; 32(14):2227-9. PubMed ID: 27153656
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A unified approach for allele frequency estimation, SNP detection and association studies based on pooled sequencing data using EM algorithms.
    Chen Q; Sun F
    BMC Genomics; 2013; 14 Suppl 1(Suppl 1):S1. PubMed ID: 23369070
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Fast individual ancestry inference from DNA sequence data leveraging allele frequencies for multiple populations.
    Bansal V; Libiger O
    BMC Bioinformatics; 2015 Jan; 16():4. PubMed ID: 25592880
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Visualizing the geography of genetic variants.
    Marcus JH; Novembre J
    Bioinformatics; 2017 Feb; 33(4):594-595. PubMed ID: 27742697
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Fast and accurate site frequency spectrum estimation from low coverage sequence data.
    Han E; Sinsheimer JS; Novembre J
    Bioinformatics; 2015 Mar; 31(5):720-7. PubMed ID: 25359894
    [TBL] [Abstract][Full Text] [Related]  

  • 8. SNP calling by sequencing pooled samples.
    Raineri E; Ferretti L; Esteve-Codina A; Nevado B; Heath S; Pérez-Enciso M
    BMC Bioinformatics; 2012 Sep; 13():239. PubMed ID: 22992255
    [TBL] [Abstract][Full Text] [Related]  

  • 9. An empirical Bayes method for genotyping and SNP detection using multi-sample next-generation sequencing data.
    Huang G; Wang S; Wang X; You N
    Bioinformatics; 2016 Nov; 32(21):3240-3245. PubMed ID: 27378300
    [TBL] [Abstract][Full Text] [Related]  

  • 10. CSHAP: efficient haplotype frequency estimation based on sparse representation.
    Zhou Y; Zhang H; Yang Y
    Bioinformatics; 2019 Aug; 35(16):2827-2833. PubMed ID: 30590428
    [TBL] [Abstract][Full Text] [Related]  

  • 11. An R package VIGoR for joint estimation of multiple linear learners with variational Bayesian inference.
    Onogi A; Arakawa A
    Bioinformatics; 2022 Jun; 38(12):3306-3309. PubMed ID: 35575313
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Fast genotyping of known SNPs through approximate k-mer matching.
    Shajii A; Yorukoglu D; William Yu Y; Berger B
    Bioinformatics; 2016 Sep; 32(17):i538-i544. PubMed ID: 27587672
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Enhanced localization of genetic samples through linkage-disequilibrium correction.
    Baran Y; Quintela I; Carracedo A; Pasaniuc B; Halperin E
    Am J Hum Genet; 2013 Jun; 92(6):882-94. PubMed ID: 23726367
    [TBL] [Abstract][Full Text] [Related]  

  • 14. RVD2: an ultra-sensitive variant detection model for low-depth heterogeneous next-generation sequencing data.
    He Y; Zhang F; Flaherty P
    Bioinformatics; 2015 Sep; 31(17):2785-93. PubMed ID: 25931517
    [TBL] [Abstract][Full Text] [Related]  

  • 15. bammds: a tool for assessing the ancestry of low-depth whole-genome data using multidimensional scaling (MDS).
    Malaspinas AS; Tange O; Moreno-Mayar JV; Rasmussen M; DeGiorgio M; Wang Y; Valdiosera CE; Politis G; Willerslev E; Nielsen R
    Bioinformatics; 2014 Oct; 30(20):2962-4. PubMed ID: 24974206
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Enhancements to the ADMIXTURE algorithm for individual ancestry estimation.
    Alexander DH; Lange K
    BMC Bioinformatics; 2011 Jun; 12():246. PubMed ID: 21682921
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Penalized estimation of haplotype frequencies.
    Ayers KL; Lange K
    Bioinformatics; 2008 Jul; 24(14):1596-602. PubMed ID: 18487240
    [TBL] [Abstract][Full Text] [Related]  

  • 18. LEI: A Novel Allele Frequency-Based Feature Selection Method for Multi-ancestry Admixed Populations.
    Wathen MJ; Gautam Y; Ghandikota S; Rao MB; Mersha TB
    Sci Rep; 2019 Jul; 9(1):11103. PubMed ID: 31366927
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Species delimitation using genome-wide SNP data.
    Leaché AD; Fujita MK; Minin VN; Bouckaert RR
    Syst Biol; 2014 Jul; 63(4):534-42. PubMed ID: 24627183
    [TBL] [Abstract][Full Text] [Related]  

  • 20. LASER server: ancestry tracing with genotypes or sequence reads.
    Taliun D; Chothani SP; Schönherr S; Forer L; Boehnke M; Abecasis GR; Wang C
    Bioinformatics; 2017 Jul; 33(13):2056-2058. PubMed ID: 28200055
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.