107 related articles for article (PubMed ID: 25012181)
1. Fast spatial ancestry via flexible allele frequency surfaces.
Rañola JM; Novembre J; Lange K
Bioinformatics; 2014 Oct; 30(20):2915-22. PubMed ID: 25012181
[TBL] [Abstract][Full Text] [Related]
2. Novel probabilistic models of spatial genetic ancestry with applications to stratification correction in genome-wide association studies.
Bhaskar A; Javanmard A; Courtade TA; Tse D
Bioinformatics; 2017 Mar; 33(6):879-885. PubMed ID: 28025204
[TBL] [Abstract][Full Text] [Related]
3. ASAFE: ancestry-specific allele frequency estimation.
Zhang QS; Browning BL; Browning SR
Bioinformatics; 2016 Jul; 32(14):2227-9. PubMed ID: 27153656
[TBL] [Abstract][Full Text] [Related]
4. A unified approach for allele frequency estimation, SNP detection and association studies based on pooled sequencing data using EM algorithms.
Chen Q; Sun F
BMC Genomics; 2013; 14 Suppl 1(Suppl 1):S1. PubMed ID: 23369070
[TBL] [Abstract][Full Text] [Related]
5. Fast individual ancestry inference from DNA sequence data leveraging allele frequencies for multiple populations.
Bansal V; Libiger O
BMC Bioinformatics; 2015 Jan; 16():4. PubMed ID: 25592880
[TBL] [Abstract][Full Text] [Related]
6. Visualizing the geography of genetic variants.
Marcus JH; Novembre J
Bioinformatics; 2017 Feb; 33(4):594-595. PubMed ID: 27742697
[TBL] [Abstract][Full Text] [Related]
7. Fast and accurate site frequency spectrum estimation from low coverage sequence data.
Han E; Sinsheimer JS; Novembre J
Bioinformatics; 2015 Mar; 31(5):720-7. PubMed ID: 25359894
[TBL] [Abstract][Full Text] [Related]
8. SNP calling by sequencing pooled samples.
Raineri E; Ferretti L; Esteve-Codina A; Nevado B; Heath S; Pérez-Enciso M
BMC Bioinformatics; 2012 Sep; 13():239. PubMed ID: 22992255
[TBL] [Abstract][Full Text] [Related]
9. An empirical Bayes method for genotyping and SNP detection using multi-sample next-generation sequencing data.
Huang G; Wang S; Wang X; You N
Bioinformatics; 2016 Nov; 32(21):3240-3245. PubMed ID: 27378300
[TBL] [Abstract][Full Text] [Related]
10. CSHAP: efficient haplotype frequency estimation based on sparse representation.
Zhou Y; Zhang H; Yang Y
Bioinformatics; 2019 Aug; 35(16):2827-2833. PubMed ID: 30590428
[TBL] [Abstract][Full Text] [Related]
11. An R package VIGoR for joint estimation of multiple linear learners with variational Bayesian inference.
Onogi A; Arakawa A
Bioinformatics; 2022 Jun; 38(12):3306-3309. PubMed ID: 35575313
[TBL] [Abstract][Full Text] [Related]
12. Fast genotyping of known SNPs through approximate k-mer matching.
Shajii A; Yorukoglu D; William Yu Y; Berger B
Bioinformatics; 2016 Sep; 32(17):i538-i544. PubMed ID: 27587672
[TBL] [Abstract][Full Text] [Related]
13. Enhanced localization of genetic samples through linkage-disequilibrium correction.
Baran Y; Quintela I; Carracedo A; Pasaniuc B; Halperin E
Am J Hum Genet; 2013 Jun; 92(6):882-94. PubMed ID: 23726367
[TBL] [Abstract][Full Text] [Related]
14. RVD2: an ultra-sensitive variant detection model for low-depth heterogeneous next-generation sequencing data.
He Y; Zhang F; Flaherty P
Bioinformatics; 2015 Sep; 31(17):2785-93. PubMed ID: 25931517
[TBL] [Abstract][Full Text] [Related]
15. bammds: a tool for assessing the ancestry of low-depth whole-genome data using multidimensional scaling (MDS).
Malaspinas AS; Tange O; Moreno-Mayar JV; Rasmussen M; DeGiorgio M; Wang Y; Valdiosera CE; Politis G; Willerslev E; Nielsen R
Bioinformatics; 2014 Oct; 30(20):2962-4. PubMed ID: 24974206
[TBL] [Abstract][Full Text] [Related]
16. Enhancements to the ADMIXTURE algorithm for individual ancestry estimation.
Alexander DH; Lange K
BMC Bioinformatics; 2011 Jun; 12():246. PubMed ID: 21682921
[TBL] [Abstract][Full Text] [Related]
17. Penalized estimation of haplotype frequencies.
Ayers KL; Lange K
Bioinformatics; 2008 Jul; 24(14):1596-602. PubMed ID: 18487240
[TBL] [Abstract][Full Text] [Related]
18. LEI: A Novel Allele Frequency-Based Feature Selection Method for Multi-ancestry Admixed Populations.
Wathen MJ; Gautam Y; Ghandikota S; Rao MB; Mersha TB
Sci Rep; 2019 Jul; 9(1):11103. PubMed ID: 31366927
[TBL] [Abstract][Full Text] [Related]
19. Species delimitation using genome-wide SNP data.
Leaché AD; Fujita MK; Minin VN; Bouckaert RR
Syst Biol; 2014 Jul; 63(4):534-42. PubMed ID: 24627183
[TBL] [Abstract][Full Text] [Related]
20. LASER server: ancestry tracing with genotypes or sequence reads.
Taliun D; Chothani SP; Schönherr S; Forer L; Boehnke M; Abecasis GR; Wang C
Bioinformatics; 2017 Jul; 33(13):2056-2058. PubMed ID: 28200055
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]