These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

338 related articles for article (PubMed ID: 25080304)

  • 1. An extended gene protein/products Boolean network model including post-transcriptional regulation.
    Benso A; Di Carlo S; Politano G; Savino A; Vasciaveo A
    Theor Biol Med Model; 2014 May; 11 Suppl 1(Suppl 1):S5. PubMed ID: 25080304
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Relative stability of network states in Boolean network models of gene regulation in development.
    Zhou JX; Samal A; d'Hérouël AF; Price ND; Huang S
    Biosystems; 2016; 142-143():15-24. PubMed ID: 26965665
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Periodic synchronization of isolated network elements facilitates simulating and inferring gene regulatory networks including stochastic molecular kinetics.
    Hettich J; Gebhardt JCM
    BMC Bioinformatics; 2022 Jan; 23(1):13. PubMed ID: 34986805
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Detection of attractors of large Boolean networks via exhaustive enumeration of appropriate subspaces of the state space.
    Berntenis N; Ebeling M
    BMC Bioinformatics; 2013 Dec; 14():361. PubMed ID: 24330355
    [TBL] [Abstract][Full Text] [Related]  

  • 5. MICRAT: a novel algorithm for inferring gene regulatory networks using time series gene expression data.
    Yang B; Xu Y; Maxwell A; Koh W; Gong P; Zhang C
    BMC Syst Biol; 2018 Dec; 12(Suppl 7):115. PubMed ID: 30547796
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Stochastic Boolean networks: an efficient approach to modeling gene regulatory networks.
    Liang J; Han J
    BMC Syst Biol; 2012 Aug; 6():113. PubMed ID: 22929591
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Diversity of temporal correlations between genes in models of noisy and noiseless gene networks.
    Ribeiro AS; Lloyd-Price J; Chowdhury S; Yli-Harja O
    Biosystems; 2011; 104(2-3):136-44. PubMed ID: 21356270
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Macromolecular crowding: chemistry and physics meet biology (Ascona, Switzerland, 10-14 June 2012).
    Foffi G; Pastore A; Piazza F; Temussi PA
    Phys Biol; 2013 Aug; 10(4):040301. PubMed ID: 23912807
    [TBL] [Abstract][Full Text] [Related]  

  • 9. CABeRNET: a Cytoscape app for augmented Boolean models of gene regulatory NETworks.
    Paroni A; Graudenzi A; Caravagna G; Damiani C; Mauri G; Antoniotti M
    BMC Bioinformatics; 2016 Feb; 17():64. PubMed ID: 26846964
    [TBL] [Abstract][Full Text] [Related]  

  • 10. An efficient algorithm for computing attractors of synchronous and asynchronous Boolean networks.
    Zheng D; Yang G; Li X; Wang Z; Liu F; He L
    PLoS One; 2013; 8(4):e60593. PubMed ID: 23585840
    [TBL] [Abstract][Full Text] [Related]  

  • 11. ViSiBooL-visualization and simulation of Boolean networks with temporal constraints.
    Schwab J; Burkovski A; Siegle L; Müssel C; Kestler HA
    Bioinformatics; 2017 Feb; 33(4):601-604. PubMed ID: 27797768
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Boolean regulatory network reconstruction using literature based knowledge with a genetic algorithm optimization method.
    Dorier J; Crespo I; Niknejad A; Liechti R; Ebeling M; Xenarios I
    BMC Bioinformatics; 2016 Oct; 17(1):410. PubMed ID: 27716031
    [TBL] [Abstract][Full Text] [Related]  

  • 13. LogBTF: gene regulatory network inference using Boolean threshold network model from single-cell gene expression data.
    Li L; Sun L; Chen G; Wong CW; Ching WK; Liu ZP
    Bioinformatics; 2023 May; 39(5):. PubMed ID: 37079737
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Asynchronous stochastic Boolean networks as gene network models.
    Zhu P; Han J
    J Comput Biol; 2014 Oct; 21(10):771-83. PubMed ID: 24937230
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Boolean network inference from time series data incorporating prior biological knowledge.
    Haider S; Pal R
    BMC Genomics; 2012; 13 Suppl 6(Suppl 6):S9. PubMed ID: 23134816
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Learning Asynchronous Boolean Networks From Single-Cell Data Using Multiobjective Cooperative Genetic Programming.
    Gao S; Sun C; Xiang C; Qin K; Lee TH
    IEEE Trans Cybern; 2022 May; 52(5):2916-2930. PubMed ID: 33027020
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Development and use of a Cytoscape app for GRNCOP2.
    Díaz-Montaña JJ; Díaz-Díaz N; Barranco CD; Ponzoni I
    Comput Methods Programs Biomed; 2019 Aug; 177():211-218. PubMed ID: 31319950
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Modeling Cellular Differentiation and Reprogramming with Gene Regulatory Networks.
    Hartmann A; Ravichandran S; Del Sol A
    Methods Mol Biol; 2019; 1975():37-51. PubMed ID: 31062304
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Stochastic multiple-valued gene networks.
    Zhu P; Han J
    IEEE Trans Biomed Circuits Syst; 2014 Feb; 8(1):42-53. PubMed ID: 24681918
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Verification and optimal control of context-sensitive probabilistic Boolean networks using model checking and polynomial optimization.
    Kobayashi K; Hiraishi K
    ScientificWorldJournal; 2014; 2014():968341. PubMed ID: 24587766
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 17.