BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

418 related articles for article (PubMed ID: 25101481)

  • 1. RNA mango aptamer-fluorophore: a bright, high-affinity complex for RNA labeling and tracking.
    Dolgosheina EV; Jeng SC; Panchapakesan SS; Cojocaru R; Chen PS; Wilson PD; Hawkins N; Wiggins PA; Unrau PJ
    ACS Chem Biol; 2014 Oct; 9(10):2412-20. PubMed ID: 25101481
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Fluorescent Visualization of Mango-tagged RNA in Polyacrylamide Gels via a Poststaining Method.
    Yaseen IM; Ang QR; Unrau PJ
    J Vis Exp; 2019 Jun; (148):. PubMed ID: 31282891
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Fluorophore ligand binding and complex stabilization of the RNA Mango and RNA Spinach aptamers.
    Jeng SC; Chan HH; Booy EP; McKenna SA; Unrau PJ
    RNA; 2016 Dec; 22(12):1884-1892. PubMed ID: 27777365
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Ribonucleoprotein purification and characterization using RNA Mango.
    Panchapakesan SSS; Ferguson ML; Hayden EJ; Chen X; Hoskins AA; Unrau PJ
    RNA; 2017 Oct; 23(10):1592-1599. PubMed ID: 28747322
    [TBL] [Abstract][Full Text] [Related]  

  • 5. RNA complex purification using high-affinity fluorescent RNA aptamer tags.
    Panchapakesan SS; Jeng SC; Unrau PJ
    Ann N Y Acad Sci; 2015 Apr; 1341():149-55. PubMed ID: 25585661
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Crystal Structures of the Mango-II RNA Aptamer Reveal Heterogeneous Fluorophore Binding and Guide Engineering of Variants with Improved Selectivity and Brightness.
    Trachman RJ; Abdolahzadeh A; Andreoni A; Cojocaru R; Knutson JR; Ryckelynck M; Unrau PJ; Ferré-D'Amaré AR
    Biochemistry; 2018 Jul; 57(26):3544-3548. PubMed ID: 29768001
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Structural basis for high-affinity fluorophore binding and activation by RNA Mango.
    Trachman RJ; Demeshkina NA; Lau MWL; Panchapakesan SSS; Jeng SCY; Unrau PJ; Ferré-D'Amaré AR
    Nat Chem Biol; 2017 Jul; 13(7):807-813. PubMed ID: 28553947
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Structure and functional reselection of the Mango-III fluorogenic RNA aptamer.
    Trachman RJ; Autour A; Jeng SCY; Abdolahzadeh A; Andreoni A; Cojocaru R; Garipov R; Dolgosheina EV; Knutson JR; Ryckelynck M; Unrau PJ; Ferré-D'Amaré AR
    Nat Chem Biol; 2019 May; 15(5):472-479. PubMed ID: 30992561
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Single-Molecule RNA Imaging Using Mango II Arrays.
    Cawte AD; Iino H; Unrau PJ; Rueda DS
    Methods Mol Biol; 2022; 2404():267-280. PubMed ID: 34694614
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Structure-Guided Engineering of the Homodimeric Mango-IV Fluorescence Turn-on Aptamer Yields an RNA FRET Pair.
    Trachman RJ; Cojocaru R; Wu D; Piszczek G; Ryckelynck M; Unrau PJ; Ferré-D'Amaré AR
    Structure; 2020 Jul; 28(7):776-785.e3. PubMed ID: 32386573
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Double-stemmed and split structural variants of fluorescent RNA Mango aptamers.
    Herrera-Gutierrez J; Burden SJ; Kobernat SE; Shults NH; Smith M; Fologea D; Hayden EJ
    RNA; 2023 Sep; 29(9):1355-1364. PubMed ID: 37268327
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Hidden intermediates in Mango III RNA aptamer folding revealed by pressure perturbation.
    Harish B; Wang J; Hayden EJ; Grabe B; Hiller W; Winter R; Royer CA
    Biophys J; 2022 Feb; 121(3):421-429. PubMed ID: 34971617
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Visualizing RNA in Live Bacterial Cells Using Fluorophore- and Quencher-Binding Aptamers.
    Sunbul M; Arora A; Jäschke A
    Methods Mol Biol; 2018; 1649():289-304. PubMed ID: 29130205
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Spectral Tuning by a Single Nucleotide Controls the Fluorescence Properties of a Fluorogenic Aptamer.
    Filonov GS; Song W; Jaffrey SR
    Biochemistry; 2019 Mar; 58(12):1560-1564. PubMed ID: 30838859
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Co-crystal structure of the iMango-III fluorescent RNA aptamer using an X-ray free-electron laser.
    Trachman RJ; Stagno JR; Conrad C; Jones CP; Fischer P; Meents A; Wang YX; Ferré-D'Amaré AR
    Acta Crystallogr F Struct Biol Commun; 2019 Aug; 75(Pt 8):547-551. PubMed ID: 31397326
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Tracking RNA with light: selection, structure, and design of fluorescence turn-on RNA aptamers.
    Trachman RJ; Ferré-D'Amaré AR
    Q Rev Biophys; 2019 Aug; 52():e8. PubMed ID: 31423956
    [TBL] [Abstract][Full Text] [Related]  

  • 17. SRB-2: a promiscuous rainbow aptamer for live-cell RNA imaging.
    Sunbul M; Jäschke A
    Nucleic Acids Res; 2018 Oct; 46(18):e110. PubMed ID: 29931157
    [TBL] [Abstract][Full Text] [Related]  

  • 18. RNA mimics of green fluorescent protein.
    Paige JS; Wu KY; Jaffrey SR
    Science; 2011 Jul; 333(6042):642-6. PubMed ID: 21798953
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Molecular mechanism related to the binding of fluorophores to Mango-II revealed by multiple-replica molecular dynamics simulations.
    Chen J; Li N; Wang X; Chen J; Zhang JZH; Zhu T
    Phys Chem Chem Phys; 2021 May; 23(17):10636-10649. PubMed ID: 33904542
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Illuminating RNA Biology: Tools for Imaging RNA in Live Mammalian Cells.
    Braselmann E; Rathbun C; Richards EM; Palmer AE
    Cell Chem Biol; 2020 Aug; 27(8):891-903. PubMed ID: 32640188
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 21.