173 related articles for article (PubMed ID: 25113665)
1. A new method for modeling coalescent processes with recombination.
Wang Y; Zhou Y; Li L; Chen X; Liu Y; Ma ZM; Xu S
BMC Bioinformatics; 2014 Aug; 15(1):273. PubMed ID: 25113665
[TBL] [Abstract][Full Text] [Related]
2. The SMC' is a highly accurate approximation to the ancestral recombination graph.
Wilton PR; Carmi S; Hobolth A
Genetics; 2015 May; 200(1):343-55. PubMed ID: 25786855
[TBL] [Abstract][Full Text] [Related]
3. The Promise of Inferring the Past Using the Ancestral Recombination Graph.
Brandt DYC; Huber CD; Chiang CWK; Ortega-Del Vecchyo D
Genome Biol Evol; 2024 Feb; 16(2):. PubMed ID: 38242694
[TBL] [Abstract][Full Text] [Related]
4. Genome-wide inference of ancestral recombination graphs.
Rasmussen MD; Hubisz MJ; Gronau I; Siepel A
PLoS Genet; 2014; 10(5):e1004342. PubMed ID: 24831947
[TBL] [Abstract][Full Text] [Related]
5. Critical assessment of coalescent simulators in modeling recombination hotspots in genomic sequences.
Yang T; Deng HW; Niu T
BMC Bioinformatics; 2014 Jan; 15():3. PubMed ID: 24387001
[TBL] [Abstract][Full Text] [Related]
6. The distribution of waiting distances in ancestral recombination graphs.
Deng Y; Song YS; Nielsen R
Theor Popul Biol; 2021 Oct; 141():34-43. PubMed ID: 34186053
[TBL] [Abstract][Full Text] [Related]
7. The Bacterial Sequential Markov Coalescent.
De Maio N; Wilson DJ
Genetics; 2017 May; 206(1):333-343. PubMed ID: 28258183
[TBL] [Abstract][Full Text] [Related]
8. Cosi2: an efficient simulator of exact and approximate coalescent with selection.
Shlyakhter I; Sabeti PC; Schaffner SF
Bioinformatics; 2014 Dec; 30(23):3427-9. PubMed ID: 25150247
[TBL] [Abstract][Full Text] [Related]
9. Markovian approximation to the finite loci coalescent with recombination along multiple sequences.
Hobolth A; Jensen JL
Theor Popul Biol; 2014 Dec; 98():48-58. PubMed ID: 24486389
[TBL] [Abstract][Full Text] [Related]
10. An accurate sequentially Markov conditional sampling distribution for the coalescent with recombination.
Paul JS; Steinrücken M; Song YS
Genetics; 2011 Apr; 187(4):1115-28. PubMed ID: 21270390
[TBL] [Abstract][Full Text] [Related]
11. Recombination as a point process along sequences.
Wiuf C; Hein J
Theor Popul Biol; 1999 Jun; 55(3):248-59. PubMed ID: 10366550
[TBL] [Abstract][Full Text] [Related]
12. Bayesian inference of ancestral recombination graphs.
Mahmoudi A; Koskela J; Kelleher J; Chan YB; Balding D
PLoS Comput Biol; 2022 Mar; 18(3):e1009960. PubMed ID: 35263345
[TBL] [Abstract][Full Text] [Related]
13. Approximating the coalescent with recombination.
McVean GA; Cardin NJ
Philos Trans R Soc Lond B Biol Sci; 2005 Jul; 360(1459):1387-93. PubMed ID: 16048782
[TBL] [Abstract][Full Text] [Related]
14. Recoverability of ancestral recombination graph topologies.
Hayman E; Ignatieva A; Hein J
Theor Popul Biol; 2023 Dec; 154():27-39. PubMed ID: 37544486
[TBL] [Abstract][Full Text] [Related]
15. Inference of Ancestral Recombination Graphs Using ARGweaver.
Hubisz M; Siepel A
Methods Mol Biol; 2020; 2090():231-266. PubMed ID: 31975170
[TBL] [Abstract][Full Text] [Related]
16. A sequential coalescent algorithm for chromosomal inversions.
Peischl S; Koch E; Guerrero RF; Kirkpatrick M
Heredity (Edinb); 2013 Sep; 111(3):200-9. PubMed ID: 23632894
[TBL] [Abstract][Full Text] [Related]
17. Ancestral Population Genomics with Jocx, a Coalescent Hidden Markov Model.
Cheng JY; Mailund T
Methods Mol Biol; 2020; 2090():167-189. PubMed ID: 31975168
[TBL] [Abstract][Full Text] [Related]
18. Fast and flexible simulation of DNA sequence data.
Chen GK; Marjoram P; Wall JD
Genome Res; 2009 Jan; 19(1):136-42. PubMed ID: 19029539
[TBL] [Abstract][Full Text] [Related]
19. Estimating divergence time and ancestral effective population size of Bornean and Sumatran orangutan subspecies using a coalescent hidden Markov model.
Mailund T; Dutheil JY; Hobolth A; Lunter G; Schierup MH
PLoS Genet; 2011 Mar; 7(3):e1001319. PubMed ID: 21408205
[TBL] [Abstract][Full Text] [Related]
20. GENOMEPOP: a program to simulate genomes in populations.
Carvajal-Rodríguez A
BMC Bioinformatics; 2008 Apr; 9():223. PubMed ID: 18447924
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]