These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

244 related articles for article (PubMed ID: 25113822)

  • 1. Dark matter in archaeal genomes: a rich source of novel mobile elements, defense systems and secretory complexes.
    Makarova KS; Wolf YI; Forterre P; Prangishvili D; Krupovic M; Koonin EV
    Extremophiles; 2014 Sep; 18(5):877-93. PubMed ID: 25113822
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Antimicrobial Peptides, Polymorphic Toxins, and Self-Nonself Recognition Systems in Archaea: an Untapped Armory for Intermicrobial Conflicts.
    Makarova KS; Wolf YI; Karamycheva S; Zhang D; Aravind L; Koonin EV
    mBio; 2019 May; 10(3):. PubMed ID: 31064832
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Defense islands in bacterial and archaeal genomes and prediction of novel defense systems.
    Makarova KS; Wolf YI; Snir S; Koonin EV
    J Bacteriol; 2011 Nov; 193(21):6039-56. PubMed ID: 21908672
    [TBL] [Abstract][Full Text] [Related]  

  • 4. The CRISPR Spacer Space Is Dominated by Sequences from Species-Specific Mobilomes.
    Shmakov SA; Sitnik V; Makarova KS; Wolf YI; Severinov KV; Koonin EV
    mBio; 2017 Sep; 8(5):. PubMed ID: 28928211
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Unprecedented Diversity of Unique CRISPR-Cas-Related Systems and Cas1 Homologs in Asgard Archaea.
    Makarova KS; Wolf YI; Shmakov SA; Liu Y; Li M; Koonin EV
    CRISPR J; 2020 Jun; 3(3):156-163. PubMed ID: 33555973
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Towards functional characterization of archaeal genomic dark matter.
    Makarova KS; Wolf YI; Koonin EV
    Biochem Soc Trans; 2019 Feb; 47(1):389-398. PubMed ID: 30710061
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Comparison of archaeal and bacterial genomes: computer analysis of protein sequences predicts novel functions and suggests a chimeric origin for the archaea.
    Koonin EV; Mushegian AR; Galperin MY; Walker DR
    Mol Microbiol; 1997 Aug; 25(4):619-37. PubMed ID: 9379893
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Unification of Cas protein families and a simple scenario for the origin and evolution of CRISPR-Cas systems.
    Makarova KS; Aravind L; Wolf YI; Koonin EV
    Biol Direct; 2011 Jul; 6():38. PubMed ID: 21756346
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Phylogenomics of Cas4 family nucleases.
    Hudaiberdiev S; Shmakov S; Wolf YI; Terns MP; Makarova KS; Koonin EV
    BMC Evol Biol; 2017 Nov; 17(1):232. PubMed ID: 29179671
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Comprehensive comparative-genomic analysis of type 2 toxin-antitoxin systems and related mobile stress response systems in prokaryotes.
    Makarova KS; Wolf YI; Koonin EV
    Biol Direct; 2009 Jun; 4():19. PubMed ID: 19493340
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The evolutionary history of archaeal MCM helicases: a case study of vertical evolution combined with hitchhiking of mobile genetic elements.
    Krupovic M; Gribaldo S; Bamford DH; Forterre P
    Mol Biol Evol; 2010 Dec; 27(12):2716-32. PubMed ID: 20581330
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Clusters of orthologous genes for 41 archaeal genomes and implications for evolutionary genomics of archaea.
    Makarova KS; Sorokin AV; Novichkov PS; Wolf YI; Koonin EV
    Biol Direct; 2007 Nov; 2():33. PubMed ID: 18042280
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Mechanisms of thermal adaptation revealed from the genomes of the Antarctic Archaea Methanogenium frigidum and Methanococcoides burtonii.
    Saunders NF; Thomas T; Curmi PM; Mattick JS; Kuczek E; Slade R; Davis J; Franzmann PD; Boone D; Rusterholtz K; Feldman R; Gates C; Bench S; Sowers K; Kadner K; Aerts A; Dehal P; Detter C; Glavina T; Lucas S; Richardson P; Larimer F; Hauser L; Land M; Cavicchioli R
    Genome Res; 2003 Jul; 13(7):1580-8. PubMed ID: 12805271
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Viral diversity threshold for adaptive immunity in prokaryotes.
    Weinberger AD; Wolf YI; Lobkovsky AE; Gilmore MS; Koonin EV
    mBio; 2012 Dec; 3(6):e00456-12. PubMed ID: 23221803
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Updated clusters of orthologous genes for Archaea: a complex ancestor of the Archaea and the byways of horizontal gene transfer.
    Wolf YI; Makarova KS; Yutin N; Koonin EV
    Biol Direct; 2012 Dec; 7():46. PubMed ID: 23241446
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Adaptation to environmental temperature is a major determinant of molecular evolutionary rates in archaea.
    Groussin M; Gouy M
    Mol Biol Evol; 2011 Sep; 28(9):2661-74. PubMed ID: 21498602
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Evolutionary Genomics of Defense Systems in Archaea and Bacteria.
    Koonin EV; Makarova KS; Wolf YI
    Annu Rev Microbiol; 2017 Sep; 71():233-261. PubMed ID: 28657885
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Proposed Role for KaiC-Like ATPases as Major Signal Transduction Hubs in Archaea.
    Makarova KS; Galperin MY; Koonin EV
    mBio; 2017 Dec; 8(6):. PubMed ID: 29208747
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Computational analysis of genes with lethal knockout phenotype and prediction of essential genes in archaea.
    Makarova KS; Zhang C; Wolf YI; Karamycheva S; Whitaker RJ; Koonin EV
    mBio; 2024 Feb; 15(2):e0309223. PubMed ID: 38189270
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Comparative genomic analysis of archaeal genotypic variants in a single population and in two different oceanic provinces.
    Béjà O; Koonin EV; Aravind L; Taylor LT; Seitz H; Stein JL; Bensen DC; Feldman RA; Swanson RV; DeLong EF
    Appl Environ Microbiol; 2002 Jan; 68(1):335-45. PubMed ID: 11772643
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.