85 related articles for article (PubMed ID: 25130987)
1. Effect O6-guanine alkylation on DNA flexibility studied by comparative molecular dynamics simulations.
Kara M; Drsata T; Lankas F; Zacharias M
Biopolymers; 2015 Jan; 103(1):23-32. PubMed ID: 25130987
[TBL] [Abstract][Full Text] [Related]
2. Influence of a cis,syn-cyclobutane pyrimidine dimer damage on DNA conformation studied by molecular dynamics simulations.
Knips A; Zacharias M
Biopolymers; 2015 Apr; 103(4):215-22. PubMed ID: 25382106
[TBL] [Abstract][Full Text] [Related]
3. Effect of 8-oxoguanine on DNA structure and deformability.
Dršata T; Kara M; Zacharias M; Lankaš F
J Phys Chem B; 2013 Oct; 117(39):11617-22. PubMed ID: 24028561
[TBL] [Abstract][Full Text] [Related]
4. The effect of S-substitution at the O6-guanine site on the structure and dynamics of a DNA oligomer containing a G:T mismatch.
Moore EA; Xu YZ
PLoS One; 2017; 12(9):e0184801. PubMed ID: 28910418
[TBL] [Abstract][Full Text] [Related]
5. Opening dynamics of 8-oxoguanine in DNA.
Every AE; Russu IM
J Mol Recognit; 2013 Apr; 26(4):175-80. PubMed ID: 23456741
[TBL] [Abstract][Full Text] [Related]
6. Mutagenicity associated with O6-methylguanine-DNA damage and mechanism of nucleotide flipping by AGT during repair.
Jena NR; Bansal M
Phys Biol; 2011 Aug; 8(4):046007. PubMed ID: 21666294
[TBL] [Abstract][Full Text] [Related]
7. O6-methylguanine-induced cell death involves exonuclease 1 as well as DNA mismatch recognition in vivo.
Klapacz J; Meira LB; Luchetti DG; Calvo JA; Bronson RT; Edelmann W; Samson LD
Proc Natl Acad Sci U S A; 2009 Jan; 106(2):576-81. PubMed ID: 19124772
[TBL] [Abstract][Full Text] [Related]
8. Solution structure of an O6-[4-oxo-4-(3-pyridyl)butyl]guanine adduct in an 11 mer DNA duplex: evidence for formation of a base triplex.
Peterson LA; Vu C; Hingerty BE; Broyde S; Cosman M
Biochemistry; 2003 Nov; 42(45):13134-44. PubMed ID: 14609323
[TBL] [Abstract][Full Text] [Related]
9. Molecular Dynamics Simulations of 5-Hydroxycytosine Damaged DNA.
Karolak A; van der Vaart A
J Phys Chem B; 2016 Jan; 120(1):42-8. PubMed ID: 26654566
[TBL] [Abstract][Full Text] [Related]
10. Global deformation facilitates flipping of damaged 8-oxo-guanine and guanine in DNA.
La Rosa G; Zacharias M
Nucleic Acids Res; 2016 Nov; 44(20):9591-9599. PubMed ID: 27651459
[TBL] [Abstract][Full Text] [Related]
11. Development of a new application of the comet assay to assess levels of O6-methylguanine in genomic DNA (CoMeth).
Ramos AA; Pedro DF; Lima CF; Collins AR; Pereira-Wilson C
Free Radic Biol Med; 2013 Jul; 60():41-8. PubMed ID: 23391575
[TBL] [Abstract][Full Text] [Related]
12. A novel, sensitive assay for O6-methyl- and O6-ethylguanine in DNA, based on repair by the enzyme O6-alkylguanine-DNA-alkyltransferase in competition with an oligonucleotide containing O6-methylguanine.
Souliotis VL; Kyrtopoulos SA
Cancer Res; 1989 Dec; 49(24 Pt 1):6997-7001. PubMed ID: 2684406
[TBL] [Abstract][Full Text] [Related]
13. Base flipping mechanism and binding strength of methyl-damaged DNA during the interaction with AGT.
Koirala RP; Adhikari NP
J Biol Phys; 2024 Mar; 50(1):71-87. PubMed ID: 38150168
[TBL] [Abstract][Full Text] [Related]
14. Nitrosamine-induced cancer: selective repair and conformational differences between O6-methylguanine residues in different positions in and around codon 12 of rat H-ras.
Georgiadis P; Smith CA; Swann PF
Cancer Res; 1991 Nov; 51(21):5843-50. PubMed ID: 1933853
[TBL] [Abstract][Full Text] [Related]
15. Destabilization of DNA duplexes by oxidative damage at guanine: implications for lesion recognition and repair.
Jiranusornkul S; Laughton CA
J R Soc Interface; 2008 Dec; 5 Suppl 3(Suppl 3):S191-8. PubMed ID: 18782724
[TBL] [Abstract][Full Text] [Related]
16. Binding of MutS protein to oligonucleotides containing a methylated or an ethylated guanine residue, and correlation with mutation frequency.
Taira K; Nakamura S; Nakano K; Maehara D; Okamoto K; Arimoto S; Loakes D; Worth L; Schaaper RM; Seio K; Sekine M; Negishi K; Negishi T
Mutat Res; 2008 Apr; 640(1-2):107-12. PubMed ID: 18243250
[TBL] [Abstract][Full Text] [Related]
17. Fluorescent molecular rotors detect
Copp W; Karimi A; Yang T; Guarné A; Luedtke NW
Chem Commun (Camb); 2024 Jan; 60(9):1156-1159. PubMed ID: 38190113
[TBL] [Abstract][Full Text] [Related]
18. Dynamic behavior of DNA base pairs containing 8-oxoguanine.
Cheng X; Kelso C; Hornak V; de los Santos C; Grollman AP; Simmerling C
J Am Chem Soc; 2005 Oct; 127(40):13906-18. PubMed ID: 16201812
[TBL] [Abstract][Full Text] [Related]
19. Contribution of opening and bending dynamics to specific recognition of DNA damage.
Seibert E; Ross JB; Osman R
J Mol Biol; 2003 Jul; 330(4):687-703. PubMed ID: 12850140
[TBL] [Abstract][Full Text] [Related]
20. An O6-methylguanine-DNA methyltransferase-like protein from Thermus thermophilus interacts with a nucleotide excision repair protein.
Morita R; Nakagawa N; Kuramitsu S; Masui R
J Biochem; 2008 Aug; 144(2):267-77. PubMed ID: 18483064
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]