211 related articles for article (PubMed ID: 25144705)
1. Recognition of double-stranded DNA using energetically activated duplexes with interstrand zippers of 1-, 2- or 4-pyrenyl-functionalized O2'-alkylated RNA monomers.
Karmakar S; Madsen AS; Guenther DC; Gibbons BC; Hrdlicka PJ
Org Biomol Chem; 2014 Oct; 12(39):7758-73. PubMed ID: 25144705
[TBL] [Abstract][Full Text] [Related]
2. Recognition of mixed-sequence DNA duplexes: design guidelines for invaders based on 2'-O-(pyren-1-yl)methyl-RNA monomers.
Karmakar S; Guenther DC; Hrdlicka PJ
J Org Chem; 2013 Dec; 78(23):12040-8. PubMed ID: 24195730
[TBL] [Abstract][Full Text] [Related]
3. Recognition of mixed-sequence DNA using double-stranded probes with interstrand zipper arrangements of O2'-triphenylene- and coronene-functionalized RNA monomers.
Karmakar S; Guenther DC; Gibbons BC; Hrdlicka PJ
Org Biomol Chem; 2017 Nov; 15(44):9362-9371. PubMed ID: 29090304
[TBL] [Abstract][Full Text] [Related]
4. Identification and characterization of second-generation invader locked nucleic acids (LNAs) for mixed-sequence recognition of double-stranded DNA.
Sau SP; Madsen AS; Podbevsek P; Andersen NK; Kumar TS; Andersen S; Rathje RL; Anderson BA; Guenther DC; Karmakar S; Kumar P; Plavec J; Wengel J; Hrdlicka PJ
J Org Chem; 2013 Oct; 78(19):9560-70. PubMed ID: 24032477
[TBL] [Abstract][Full Text] [Related]
5. Recognition of Double-Stranded DNA Using Energetically Activated Duplexes Modified with N2'-Pyrene-, Perylene-, or Coronene-Functionalized 2'-N-Methyl-2'-amino-DNA Monomers.
Anderson BA; Onley JJ; Hrdlicka PJ
J Org Chem; 2015 Jun; 80(11):5395-406. PubMed ID: 25984765
[TBL] [Abstract][Full Text] [Related]
6. Synthesis and biophysical characterization of oligonucleotides modified with O2'-alkylated RNA monomers featuring substituted pyrene moieties.
Karmakar S; Horrocks T; Gibbons BC; Guenther DC; Emehiser R; Hrdlicka PJ
Org Biomol Chem; 2019 Jan; 17(3):609-621. PubMed ID: 30575837
[TBL] [Abstract][Full Text] [Related]
7. Invader LNA: efficient targeting of short double stranded DNA.
Sau SP; Kumar TS; Hrdlicka PJ
Org Biomol Chem; 2010 May; 8(9):2028-36. PubMed ID: 20401378
[TBL] [Abstract][Full Text] [Related]
8. Impact of non-nucleotidic bulges on recognition of mixed-sequence dsDNA by pyrene-functionalized Invader probes.
Guenther DC; Emehiser RG; Inskeep A; Karmakar S; Hrdlicka PJ
Org Biomol Chem; 2020 Jun; 18(24):4645-4655. PubMed ID: 32520054
[TBL] [Abstract][Full Text] [Related]
9. Recognition of double-stranded DNA using LNA-modified toehold Invader probes.
Adhikari SP; Vukelich P; Guenther DC; Karmakar S; Hrdlicka PJ
Org Biomol Chem; 2021 Nov; 19(42):9276-9290. PubMed ID: 34657934
[TBL] [Abstract][Full Text] [Related]
10. Mixed-Sequence Recognition of Double-Stranded DNA Using Enzymatically Stable Phosphorothioate Invader Probes.
Anderson BA; Karmakar S; Hrdlicka PJ
Molecules; 2015 Jul; 20(8):13780-93. PubMed ID: 26230684
[TBL] [Abstract][Full Text] [Related]
11. Chimeric γPNA-Invader probes: using intercalator-functionalized oligonucleotides to enhance the DNA-targeting properties of γPNA.
Emehiser RG; Hrdlicka PJ
Org Biomol Chem; 2020 Feb; 18(7):1359-1368. PubMed ID: 31984413
[TBL] [Abstract][Full Text] [Related]
12. Merging Two Strategies for Mixed-Sequence Recognition of Double-Stranded DNA: Pseudocomplementary Invader Probes.
Anderson BA; Hrdlicka PJ
J Org Chem; 2016 Apr; 81(8):3335-46. PubMed ID: 26998918
[TBL] [Abstract][Full Text] [Related]
13. Bulged Invader probes: activated duplexes for mixed-sequence dsDNA recognition with improved thermodynamic and kinetic profiles.
Guenther DC; Karmakar S; Hrdlicka PJ
Chem Commun (Camb); 2015 Oct; 51(81):15051-4. PubMed ID: 26314212
[TBL] [Abstract][Full Text] [Related]
14. Nicked Invader probes: multistranded and sequence-unrestricted recognition of double-stranded DNA.
Adhikari SP; Karmakar S; Hrdlicka PJ
Org Biomol Chem; 2022 Feb; 20(5):1019-1030. PubMed ID: 34874037
[TBL] [Abstract][Full Text] [Related]
15. Head-to-head comparison of LNA,
Emehiser RG; Hall E; Guenther DC; Karmakar S; Hrdlicka PJ
Org Biomol Chem; 2019 Dec; 18(1):56-65. PubMed ID: 31681928
[TBL] [Abstract][Full Text] [Related]
16. Invader probes: Harnessing the energy of intercalation to facilitate recognition of chromosomal DNA for diagnostic applications.
Guenther DC; Anderson GH; Karmakar S; Anderson BA; Didion BA; Guo W; Verstegen JP; Hrdlicka PJ
Chem Sci; 2015 Aug; 6(8):5006-5015. PubMed ID: 26240741
[TBL] [Abstract][Full Text] [Related]
17. Factors Impacting Invader-Mediated Recognition of Double-Stranded DNA.
Shepard CP; Emehiser RG; Karmakar S; Hrdlicka PJ
Molecules; 2022 Dec; 28(1):. PubMed ID: 36615321
[TBL] [Abstract][Full Text] [Related]
18. Serine-γPNA, Invader probes, and chimeras thereof: three probe chemistries that enable sequence-unrestricted recognition of double-stranded DNA.
Emehiser RG; Dhuri K; Shepard C; Karmakar S; Bahal R; Hrdlicka PJ
Org Biomol Chem; 2022 Nov; 20(44):8714-8724. PubMed ID: 36285843
[TBL] [Abstract][Full Text] [Related]
19. Targeting of mixed sequence double-stranded DNA using pyrene-functionalized 2'-amino-alpha-l-LNA.
Hrdlicka PJ; Kumar TS; Wengel J
Chem Commun (Camb); 2005 Sep; (34):4279-81. PubMed ID: 16113721
[TBL] [Abstract][Full Text] [Related]
20. DNA-selective hybridization and dual strand invasion of short double-stranded DNA using pyren-1-ylcarbonyl-functionalized 4'-C-piperazinomethyl-DNA.
Bryld T; Hojland T; Wengel J
Chem Commun (Camb); 2004 May; (9):1064-5. PubMed ID: 15116186
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]