879 related articles for article (PubMed ID: 25159147)
1. Ribosome profiling reveals pervasive translation outside of annotated protein-coding genes.
Ingolia NT; Brar GA; Stern-Ginossar N; Harris MS; Talhouarne GJ; Jackson SE; Wills MR; Weissman JS
Cell Rep; 2014 Sep; 8(5):1365-79. PubMed ID: 25159147
[TBL] [Abstract][Full Text] [Related]
2. Pateamine A-sensitive ribosome profiling reveals the scope of translation in mouse embryonic stem cells.
Popa A; Lebrigand K; Barbry P; Waldmann R
BMC Genomics; 2016 Jan; 17():52. PubMed ID: 26764022
[TBL] [Abstract][Full Text] [Related]
3. Global analysis of ribosome-associated noncoding RNAs unveils new modes of translational regulation.
Bazin J; Baerenfaller K; Gosai SJ; Gregory BD; Crespi M; Bailey-Serres J
Proc Natl Acad Sci U S A; 2017 Nov; 114(46):E10018-E10027. PubMed ID: 29087317
[TBL] [Abstract][Full Text] [Related]
4. Ribosome profiling provides evidence that large noncoding RNAs do not encode proteins.
Guttman M; Russell P; Ingolia NT; Weissman JS; Lander ES
Cell; 2013 Jul; 154(1):240-51. PubMed ID: 23810193
[TBL] [Abstract][Full Text] [Related]
5. Rfoot: Transcriptome-Scale Identification of RNA-Protein Complexes from Ribosome Profiling Data.
Ji Z
Curr Protoc Mol Biol; 2018 Oct; 124(1):e66. PubMed ID: 30168907
[TBL] [Abstract][Full Text] [Related]
6. Ribosome profiling in archaea reveals leaderless translation, novel translational initiation sites, and ribosome pausing at single codon resolution.
Gelsinger DR; Dallon E; Reddy R; Mohammad F; Buskirk AR; DiRuggiero J
Nucleic Acids Res; 2020 Jun; 48(10):5201-5216. PubMed ID: 32382758
[TBL] [Abstract][Full Text] [Related]
7. Detecting actively translated open reading frames in ribosome profiling data.
Calviello L; Mukherjee N; Wyler E; Zauber H; Hirsekorn A; Selbach M; Landthaler M; Obermayer B; Ohler U
Nat Methods; 2016 Feb; 13(2):165-70. PubMed ID: 26657557
[TBL] [Abstract][Full Text] [Related]
8. Ribosomal profiling adds new coding sequences to the proteome.
Mumtaz MA; Couso JP
Biochem Soc Trans; 2015 Dec; 43(6):1271-6. PubMed ID: 26614672
[TBL] [Abstract][Full Text] [Related]
9. Genome-wide search for novel human uORFs and N-terminal protein extensions using ribosomal footprinting.
Fritsch C; Herrmann A; Nothnagel M; Szafranski K; Huse K; Schumann F; Schreiber S; Platzer M; Krawczak M; Hampe J; Brosch M
Genome Res; 2012 Nov; 22(11):2208-18. PubMed ID: 22879431
[TBL] [Abstract][Full Text] [Related]
10. Translational dynamics revealed by genome-wide profiling of ribosome footprints in Arabidopsis.
Juntawong P; Girke T; Bazin J; Bailey-Serres J
Proc Natl Acad Sci U S A; 2014 Jan; 111(1):E203-12. PubMed ID: 24367078
[TBL] [Abstract][Full Text] [Related]
11. Dynamics of ribosome scanning and recycling revealed by translation complex profiling.
Archer SK; Shirokikh NE; Beilharz TH; Preiss T
Nature; 2016 Jul; 535(7613):570-4. PubMed ID: 27437580
[TBL] [Abstract][Full Text] [Related]
12. Ribosome elongating footprints denoised by wavelet transform comprehensively characterize dynamic cellular translation events.
Xu Z; Hu L; Shi B; Geng S; Xu L; Wang D; Lu ZJ
Nucleic Acids Res; 2018 Oct; 46(18):e109. PubMed ID: 29945224
[TBL] [Abstract][Full Text] [Related]
13. Limited Evidence for Protein Products of Noncoding Transcripts in the HEK293T Cellular Cytosol.
Bogaert A; Fijalkowska D; Staes A; Van de Steene T; Demol H; Gevaert K
Mol Cell Proteomics; 2022 Aug; 21(8):100264. PubMed ID: 35788065
[TBL] [Abstract][Full Text] [Related]
14. RibORF: Identifying Genome-Wide Translated Open Reading Frames Using Ribosome Profiling.
Ji Z
Curr Protoc Mol Biol; 2018 Oct; 124(1):e67. PubMed ID: 30178897
[TBL] [Abstract][Full Text] [Related]
15. Long non-coding RNAs as a source of new peptides.
Ruiz-Orera J; Messeguer X; Subirana JA; Alba MM
Elife; 2014 Sep; 3():e03523. PubMed ID: 25233276
[TBL] [Abstract][Full Text] [Related]
16. Evolution of new proteins from translated sORFs in long non-coding RNAs.
Ruiz-Orera J; Villanueva-Cañas JL; Albà MM
Exp Cell Res; 2020 Jun; 391(1):111940. PubMed ID: 32156600
[TBL] [Abstract][Full Text] [Related]
17. Thousands of novel translated open reading frames in humans inferred by ribosome footprint profiling.
Raj A; Wang SH; Shim H; Harpak A; Li YI; Engelmann B; Stephens M; Gilad Y; Pritchard JK
Elife; 2016 May; 5():. PubMed ID: 27232982
[TBL] [Abstract][Full Text] [Related]
18. The translation of non-canonical open reading frames controls mucosal immunity.
Jackson R; Kroehling L; Khitun A; Bailis W; Jarret A; York AG; Khan OM; Brewer JR; Skadow MH; Duizer C; Harman CCD; Chang L; Bielecki P; Solis AG; Steach HR; Slavoff S; Flavell RA
Nature; 2018 Dec; 564(7736):434-438. PubMed ID: 30542152
[TBL] [Abstract][Full Text] [Related]
19. Insights into the mechanisms of eukaryotic translation gained with ribosome profiling.
Andreev DE; O'Connor PB; Loughran G; Dmitriev SE; Baranov PV; Shatsky IN
Nucleic Acids Res; 2017 Jan; 45(2):513-526. PubMed ID: 27923997
[TBL] [Abstract][Full Text] [Related]
20. Comparative analysis of protein-coding and long non-coding transcripts based on RNA sequence features.
Volkova OA; Kondrakhin YV; Kashapov TA; Sharipov RN
J Bioinform Comput Biol; 2018 Apr; 16(2):1840013. PubMed ID: 29739305
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
