175 related articles for article (PubMed ID: 25208325)
1. visPIG--a web tool for producing multi-region, multi-track, multi-scale plots of genetic data.
Scales M; Jäger R; Migliorini G; Houlston RS; Henrion MY
PLoS One; 2014; 9(9):e107497. PubMed ID: 25208325
[TBL] [Abstract][Full Text] [Related]
2. Statistical Viewer: a tool to upload and integrate linkage and association data as plots displayed within the Ensembl genome browser.
Stenger JE; Xu H; Haynes C; Hauser ER; Pericak-Vance M; Goldschmidt-Clermont PJ; Vance JM
BMC Bioinformatics; 2005 Apr; 6():95. PubMed ID: 15826305
[TBL] [Abstract][Full Text] [Related]
3. WashU Epigenome Browser update 2022.
Li D; Purushotham D; Harrison JK; Hsu S; Zhuo X; Fan C; Liu S; Xu V; Chen S; Xu J; Ouyang S; Wu AS; Wang T
Nucleic Acids Res; 2022 Jul; 50(W1):W774-W781. PubMed ID: 35412637
[TBL] [Abstract][Full Text] [Related]
4. The UCSC Genome Browser.
Karolchik D; Hinrichs AS; Kent WJ
Curr Protoc Bioinformatics; 2009 Dec; Chapter 1():Unit1.4. PubMed ID: 19957273
[TBL] [Abstract][Full Text] [Related]
5. Navigating protected genomics data with UCSC Genome Browser in a Box.
Haeussler M; Raney BJ; Hinrichs AS; Clawson H; Zweig AS; Karolchik D; Casper J; Speir ML; Haussler D; Kent WJ
Bioinformatics; 2015 Mar; 31(5):764-6. PubMed ID: 25348212
[TBL] [Abstract][Full Text] [Related]
6. The UCSC Genome Browser.
Karolchik D; Hinrichs AS; Kent WJ
Curr Protoc Bioinformatics; 2012 Dec; Chapter 1():1.4.1-1.4.33. PubMed ID: 23255150
[TBL] [Abstract][Full Text] [Related]
7. The UCSC Genome Browser.
Karolchik D; Hinrichs AS; Kent WJ
Curr Protoc Bioinformatics; 2007 Mar; Chapter 1():Unit 1.4. PubMed ID: 18428780
[TBL] [Abstract][Full Text] [Related]
8. The UCSC Cancer Genomics Browser: update 2011.
Sanborn JZ; Benz SC; Craft B; Szeto C; Kober KM; Meyer L; Vaske CJ; Goldman M; Smith KE; Kuhn RM; Karolchik D; Kent WJ; Stuart JM; Haussler D; Zhu J
Nucleic Acids Res; 2011 Jan; 39(Database issue):D951-9. PubMed ID: 21059681
[TBL] [Abstract][Full Text] [Related]
9. RNASeqBrowser: a genome browser for simultaneous visualization of raw strand specific RNAseq reads and UCSC genome browser custom tracks.
An J; Lai J; Wood DL; Sajjanhar A; Wang C; Tevz G; Lehman ML; Nelson CC
BMC Genomics; 2015 Mar; 16(1):145. PubMed ID: 25766521
[TBL] [Abstract][Full Text] [Related]
10. UCSC Data Integrator and Variant Annotation Integrator.
Hinrichs AS; Raney BJ; Speir ML; Rhead B; Casper J; Karolchik D; Kuhn RM; Rosenbloom KR; Zweig AS; Haussler D; Kent WJ
Bioinformatics; 2016 May; 32(9):1430-2. PubMed ID: 26740527
[TBL] [Abstract][Full Text] [Related]
11. Track data hubs enable visualization of user-defined genome-wide annotations on the UCSC Genome Browser.
Raney BJ; Dreszer TR; Barber GP; Clawson H; Fujita PA; Wang T; Nguyen N; Paten B; Zweig AS; Karolchik D; Kent WJ
Bioinformatics; 2014 Apr; 30(7):1003-5. PubMed ID: 24227676
[TBL] [Abstract][Full Text] [Related]
12. The UCSC Genome Browser database: 2014 update.
Karolchik D; Barber GP; Casper J; Clawson H; Cline MS; Diekhans M; Dreszer TR; Fujita PA; Guruvadoo L; Haeussler M; Harte RA; Heitner S; Hinrichs AS; Learned K; Lee BT; Li CH; Raney BJ; Rhead B; Rosenbloom KR; Sloan CA; Speir ML; Zweig AS; Haussler D; Kuhn RM; Kent WJ
Nucleic Acids Res; 2014 Jan; 42(Database issue):D764-70. PubMed ID: 24270787
[TBL] [Abstract][Full Text] [Related]
13. The UCSC Genome Browser database: 2019 update.
Haeussler M; Zweig AS; Tyner C; Speir ML; Rosenbloom KR; Raney BJ; Lee CM; Lee BT; Hinrichs AS; Gonzalez JN; Gibson D; Diekhans M; Clawson H; Casper J; Barber GP; Haussler D; Kuhn RM; Kent WJ
Nucleic Acids Res; 2019 Jan; 47(D1):D853-D858. PubMed ID: 30407534
[TBL] [Abstract][Full Text] [Related]
14. GSV: a web-based genome synteny viewer for customized data.
Revanna KV; Chiu CC; Bierschank E; Dong Q
BMC Bioinformatics; 2011 Aug; 12():316. PubMed ID: 21810250
[TBL] [Abstract][Full Text] [Related]
15. SynTView - an interactive multi-view genome browser for next-generation comparative microorganism genomics.
Lechat P; Souche E; Moszer I
BMC Bioinformatics; 2013 Sep; 14():277. PubMed ID: 24053737
[TBL] [Abstract][Full Text] [Related]
16. UCSC genome browser tutorial.
Zweig AS; Karolchik D; Kuhn RM; Haussler D; Kent WJ
Genomics; 2008 Aug; 92(2):75-84. PubMed ID: 18514479
[TBL] [Abstract][Full Text] [Related]
17. The UCSC Genome Browser database: 2023 update.
Nassar LR; Barber GP; Benet-Pagès A; Casper J; Clawson H; Diekhans M; Fischer C; Gonzalez JN; Hinrichs AS; Lee BT; Lee CM; Muthuraman P; Nguy B; Pereira T; Nejad P; Perez G; Raney BJ; Schmelter D; Speir ML; Wick BD; Zweig AS; Haussler D; Kuhn RM; Haeussler M; Kent WJ
Nucleic Acids Res; 2023 Jan; 51(D1):D1188-D1195. PubMed ID: 36420891
[TBL] [Abstract][Full Text] [Related]
18. The qBED track: a novel genome browser visualization for point processes.
Moudgil A; Li D; Hsu S; Purushotham D; Wang T; Mitra RD
Bioinformatics; 2021 May; 37(8):1168-1170. PubMed ID: 32941613
[TBL] [Abstract][Full Text] [Related]
19. The UCSC Genome Browser.
Karolchik D; Hinrichs AS; Kent WJ
Curr Protoc Hum Genet; 2011 Oct; Chapter 18():18.6.1-18.6.33. PubMed ID: 21975940
[TBL] [Abstract][Full Text] [Related]
20. Comparing genomic and epigenomic features across species using the WashU Comparative Epigenome Browser.
Zhuo X; Hsu S; Purushotham D; Kuntala PK; Harrison JK; Du AY; Chen S; Li D; Wang T
Genome Res; 2023 May; 33(5):824-835. PubMed ID: 37156621
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]