353 related articles for article (PubMed ID: 25209199)
1. DNA metabarcoding and the cytochrome c oxidase subunit I marker: not a perfect match.
Deagle BE; Jarman SN; Coissac E; Pompanon F; Taberlet P
Biol Lett; 2014 Sep; 10(9):. PubMed ID: 25209199
[TBL] [Abstract][Full Text] [Related]
2. Mitochondrial cytochrome c oxidase subunit I (COI) metabarcoding of Foraminifera communities using taxon-specific primers.
Macher JN; Bloska DM; Holzmann M; Girard EB; Pawlowski J; Renema W
PeerJ; 2022; 10():e13952. PubMed ID: 36093332
[TBL] [Abstract][Full Text] [Related]
3. Comparison of environmental DNA and bulk-sample metabarcoding using highly degenerate cytochrome c oxidase I primers.
Macher JN; Vivancos A; Piggott JJ; Centeno FC; Matthaei CD; Leese F
Mol Ecol Resour; 2018 Nov; 18(6):1456-1468. PubMed ID: 30129704
[TBL] [Abstract][Full Text] [Related]
4. Can DNA-Based Ecosystem Assessments Quantify Species Abundance? Testing Primer Bias and Biomass--Sequence Relationships with an Innovative Metabarcoding Protocol.
Elbrecht V; Leese F
PLoS One; 2015; 10(7):e0130324. PubMed ID: 26154168
[TBL] [Abstract][Full Text] [Related]
5. Why the COI barcode should be the community DNA metabarcode for the metazoa.
Andújar C; Arribas P; Yu DW; Vogler AP; Emerson BC
Mol Ecol; 2018 Oct; 27(20):3968-3975. PubMed ID: 30129071
[TBL] [Abstract][Full Text] [Related]
6. New mitochondrial primers for metabarcoding of insects, designed and evaluated using in silico methods.
Marquina D; Andersson AF; Ronquist F
Mol Ecol Resour; 2019 Jan; 19(1):90-104. PubMed ID: 30226026
[TBL] [Abstract][Full Text] [Related]
7. COI metabarcoding primer choice affects richness and recovery of indicator taxa in freshwater systems.
Hajibabaei M; Porter TM; Wright M; Rudar J
PLoS One; 2019; 14(9):e0220953. PubMed ID: 31513585
[TBL] [Abstract][Full Text] [Related]
8. Sensitivity and accuracy of high-throughput metabarcoding methods for early detection of invasive fish species.
Hatzenbuhler C; Kelly JR; Martinson J; Okum S; Pilgrim E
Sci Rep; 2017 Apr; 7():46393. PubMed ID: 28406159
[TBL] [Abstract][Full Text] [Related]
9. Universal COI primers for DNA barcoding amphibians.
Che J; Chen HM; Yang JX; Jin JQ; Jiang K; Yuan ZY; Murphy RW; Zhang YP
Mol Ecol Resour; 2012 Mar; 12(2):247-58. PubMed ID: 22145866
[TBL] [Abstract][Full Text] [Related]
10. Preparation of Amplicon Libraries for Metabarcoding of Marine Eukaryotes Using Illumina MiSeq: The Dual-PCR Method.
Bourlat SJ; Haenel Q; Finnman J; Leray M
Methods Mol Biol; 2016; 1452():197-207. PubMed ID: 27460379
[TBL] [Abstract][Full Text] [Related]
11. First large-scale DNA barcoding assessment of reptiles in the biodiversity hotspot of Madagascar, based on newly designed COI primers.
Nagy ZT; Sonet G; Glaw F; Vences M
PLoS One; 2012; 7(3):e34506. PubMed ID: 22479636
[TBL] [Abstract][Full Text] [Related]
12. Environmental metabarcodes for insects: in silico PCR reveals potential for taxonomic bias.
Clarke LJ; Soubrier J; Weyrich LS; Cooper A
Mol Ecol Resour; 2014 Nov; 14(6):1160-70. PubMed ID: 24751203
[TBL] [Abstract][Full Text] [Related]
13. The design and testing of mini-barcode markers in marine lobsters.
Govender A; Groeneveld J; Singh S; Willows-Munro S
PLoS One; 2019; 14(1):e0210492. PubMed ID: 30677051
[TBL] [Abstract][Full Text] [Related]
14. Priming of a DNA metabarcoding approach for species identification and inventory in marine macrobenthic communities.
Hollatz C; Leite BR; Lobo J; Froufe H; Egas C; Costa FO
Genome; 2017 Mar; 60(3):260-271. PubMed ID: 28145743
[TBL] [Abstract][Full Text] [Related]
15. Metabarcoding of marine environmental DNA based on mitochondrial and nuclear genes.
Günther B; Knebelsberger T; Neumann H; Laakmann S; Martínez Arbizu P
Sci Rep; 2018 Oct; 8(1):14822. PubMed ID: 30287908
[TBL] [Abstract][Full Text] [Related]
16. Performance comparison of genetic markers for high-throughput sequencing-based biodiversity assessment in complex communities.
Zhan A; Bailey SA; Heath DD; Macisaac HJ
Mol Ecol Resour; 2014 Sep; 14(5):1049-59. PubMed ID: 24655333
[TBL] [Abstract][Full Text] [Related]
17. DNA barcoding of three species (Canis aureus, Canis lupus and Vulpes vulpes) of Canidae.
Aksöyek E; İbiş O; Özcan S; Moradi M; Tez C
Mitochondrial DNA A DNA Mapp Seq Anal; 2017 Sep; 28(5):747-755. PubMed ID: 27180732
[TBL] [Abstract][Full Text] [Related]
18. DNA metabarcoding of insects and allies: an evaluation of primers and pipelines.
Brandon-Mong GJ; Gan HM; Sing KW; Lee PS; Lim PE; Wilson JJ
Bull Entomol Res; 2015 Dec; 105(6):717-27. PubMed ID: 26344799
[TBL] [Abstract][Full Text] [Related]
19. Redesign of PCR primers for mitochondrial cytochrome c oxidase subunit I for marine invertebrates and application in all-taxa biotic surveys.
Geller J; Meyer C; Parker M; Hawk H
Mol Ecol Resour; 2013 Sep; 13(5):851-61. PubMed ID: 23848937
[TBL] [Abstract][Full Text] [Related]
20. PEMA: a flexible Pipeline for Environmental DNA Metabarcoding Analysis of the 16S/18S ribosomal RNA, ITS, and COI marker genes.
Zafeiropoulos H; Viet HQ; Vasileiadou K; Potirakis A; Arvanitidis C; Topalis P; Pavloudi C; Pafilis E
Gigascience; 2020 Mar; 9(3):. PubMed ID: 32161947
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]