264 related articles for article (PubMed ID: 25230706)
1. Personalized Oncology Suite: integrating next-generation sequencing data and whole-slide bioimages.
Dander A; Baldauf M; Sperk M; Pabinger S; Hiltpolt B; Trajanoski Z
BMC Bioinformatics; 2014 Sep; 15(1):306. PubMed ID: 25230706
[TBL] [Abstract][Full Text] [Related]
2. An integrative variant analysis suite for whole exome next-generation sequencing data.
Challis D; Yu J; Evani US; Jackson AR; Paithankar S; Coarfa C; Milosavljevic A; Gibbs RA; Yu F
BMC Bioinformatics; 2012 Jan; 13():8. PubMed ID: 22239737
[TBL] [Abstract][Full Text] [Related]
3. STAR: an integrated solution to management and visualization of sequencing data.
Wang T; Liu J; Shen L; Tonti-Filippini J; Zhu Y; Jia H; Lister R; Whitaker JW; Ecker JR; Millar AH; Ren B; Wang W
Bioinformatics; 2013 Dec; 29(24):3204-10. PubMed ID: 24078702
[TBL] [Abstract][Full Text] [Related]
4. STINGRAY: system for integrated genomic resources and analysis.
Wagner G; Jardim R; Tschoeke DA; Loureiro DR; Ocaña KA; Ribeiro AC; Emmel VE; Probst CM; Pitaluga AN; Grisard EC; Cavalcanti MC; Campos ML; Mattoso M; Dávila AM
BMC Res Notes; 2014 Mar; 7():132. PubMed ID: 24606808
[TBL] [Abstract][Full Text] [Related]
5. INDELseek: detection of complex insertions and deletions from next-generation sequencing data.
Au CH; Leung AY; Kwong A; Chan TL; Ma ES
BMC Genomics; 2017 Jan; 18(1):16. PubMed ID: 28056804
[TBL] [Abstract][Full Text] [Related]
6. INSaFLU: an automated open web-based bioinformatics suite "from-reads" for influenza whole-genome-sequencing-based surveillance.
Borges V; Pinheiro M; Pechirra P; Guiomar R; Gomes JP
Genome Med; 2018 Jun; 10(1):46. PubMed ID: 29954441
[TBL] [Abstract][Full Text] [Related]
7. A Genomic Analysis Workflow for Colorectal Cancer Precision Oncology.
Corti G; Bartolini A; Crisafulli G; Novara L; Rospo G; Montone M; Negrino C; Mussolin B; Buscarino M; Isella C; Barault L; Siravegna G; Siena S; Marsoni S; Di Nicolantonio F; Medico E; Bardelli A
Clin Colorectal Cancer; 2019 Jun; 18(2):91-101.e3. PubMed ID: 30981604
[TBL] [Abstract][Full Text] [Related]
8. Application of next-generation sequencing in clinical oncology to advance personalized treatment of cancer.
Guan YF; Li GR; Wang RJ; Yi YT; Yang L; Jiang D; Zhang XP; Peng Y
Chin J Cancer; 2012 Oct; 31(10):463-70. PubMed ID: 22980418
[TBL] [Abstract][Full Text] [Related]
9. Next generation sequencing in cancer: opportunities and challenges for precision cancer medicine.
Paolillo C; Londin E; Fortina P
Scand J Clin Lab Invest Suppl; 2016; 245():S84-91. PubMed ID: 27542004
[TBL] [Abstract][Full Text] [Related]
10. SNiPlay3: a web-based application for exploration and large scale analyses of genomic variations.
Dereeper A; Homa F; Andres G; Sempere G; Sarah G; Hueber Y; Dufayard JF; Ruiz M
Nucleic Acids Res; 2015 Jul; 43(W1):W295-300. PubMed ID: 26040700
[TBL] [Abstract][Full Text] [Related]
11. Correlation of Somatic Genomic Alterations Between Tissue Genomics and ctDNA Employing Next-Generation Sequencing: Analysis of Lung and Gastrointestinal Cancers.
Toor OM; Ahmed Z; Bahaj W; Boda U; Cummings LS; McNally ME; Kennedy KF; Pluard TJ; Hussain A; Subramanian J; Masood A
Mol Cancer Ther; 2018 May; 17(5):1123-1132. PubMed ID: 29500272
[TBL] [Abstract][Full Text] [Related]
12. PGen: large-scale genomic variations analysis workflow and browser in SoyKB.
Liu Y; Khan SM; Wang J; Rynge M; Zhang Y; Zeng S; Chen S; Maldonado Dos Santos JV; Valliyodan B; Calyam PP; Merchant N; Nguyen HT; Xu D; Joshi T
BMC Bioinformatics; 2016 Oct; 17(Suppl 13):337. PubMed ID: 27766951
[TBL] [Abstract][Full Text] [Related]
13. AACR precision medicine series: Highlights of the integrating clinical genomics and cancer therapy meeting.
Maggi E; Montagna C
Mutat Res; 2015 Dec; 782():44-51. PubMed ID: 26554403
[TBL] [Abstract][Full Text] [Related]
14. AMLVaran: a software approach to implement variant analysis of targeted NGS sequencing data in an oncological care setting.
Wünsch C; Banck H; Müller-Tidow C; Dugas M
BMC Med Genomics; 2020 Feb; 13(1):17. PubMed ID: 32019565
[TBL] [Abstract][Full Text] [Related]
15. Cancer Digital Slide Archive: an informatics resource to support integrated in silico analysis of TCGA pathology data.
Gutman DA; Cobb J; Somanna D; Park Y; Wang F; Kurc T; Saltz JH; Brat DJ; Cooper LA
J Am Med Inform Assoc; 2013; 20(6):1091-8. PubMed ID: 23893318
[TBL] [Abstract][Full Text] [Related]
16. An integrated SNP mining and utilization (ISMU) pipeline for next generation sequencing data.
Azam S; Rathore A; Shah TM; Telluri M; Amindala B; Ruperao P; Katta MA; Varshney RK
PLoS One; 2014; 9(7):e101754. PubMed ID: 25003610
[TBL] [Abstract][Full Text] [Related]
17. Next-generation sequencing in the clinic: promises and challenges.
Xuan J; Yu Y; Qing T; Guo L; Shi L
Cancer Lett; 2013 Nov; 340(2):284-95. PubMed ID: 23174106
[TBL] [Abstract][Full Text] [Related]
18. TQuest, A Web-Based Platform to Enable Precision Medicine by Linking a Tumor's Genetic Defects to Therapeutic Options.
Gershkovich P; Platt J; Knopf J; Tasoulis MK; Shi W; Pusztai L; Hatzis C
JCO Clin Cancer Inform; 2018 Dec; 2():1-13. PubMed ID: 30652574
[TBL] [Abstract][Full Text] [Related]
19. mInDel: a high-throughput and efficient pipeline for genome-wide InDel marker development.
Lv Y; Liu Y; Zhao H
BMC Genomics; 2016 Apr; 17():290. PubMed ID: 27079510
[TBL] [Abstract][Full Text] [Related]
20. Next generation sequencing: implications in personalized medicine and pharmacogenomics.
Rabbani B; Nakaoka H; Akhondzadeh S; Tekin M; Mahdieh N
Mol Biosyst; 2016 May; 12(6):1818-30. PubMed ID: 27066891
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]