172 related articles for article (PubMed ID: 25243980)
1. Thiamine pyrophosphate riboswitch in some representative plant species: a bioinformatics study.
Yadav S; Swati D; Chandrasekharan H
J Comput Biol; 2015 Jan; 22(1):1-9. PubMed ID: 25243980
[TBL] [Abstract][Full Text] [Related]
2. Structure of the eukaryotic thiamine pyrophosphate riboswitch with its regulatory ligand.
Thore S; Leibundgut M; Ban N
Science; 2006 May; 312(5777):1208-11. PubMed ID: 16675665
[TBL] [Abstract][Full Text] [Related]
3. Conformational Dynamics of thiM Riboswitch To Understand the Gene Regulation Mechanism Using Markov State Modeling and the Residual Fluctuation Network Approach.
Kesherwani M; N H V K; Velmurugan D
J Chem Inf Model; 2018 Aug; 58(8):1638-1651. PubMed ID: 29939019
[TBL] [Abstract][Full Text] [Related]
4. Structural basis of thiamine pyrophosphate analogues binding to the eukaryotic riboswitch.
Thore S; Frick C; Ban N
J Am Chem Soc; 2008 Jul; 130(26):8116-7. PubMed ID: 18533652
[TBL] [Abstract][Full Text] [Related]
5. Structural basis for gene regulation by a thiamine pyrophosphate-sensing riboswitch.
Serganov A; Polonskaia A; Phan AT; Breaker RR; Patel DJ
Nature; 2006 Jun; 441(7097):1167-71. PubMed ID: 16728979
[TBL] [Abstract][Full Text] [Related]
6. Conformational changes in the expression domain of the Escherichia coli thiM riboswitch.
Rentmeister A; Mayer G; Kuhn N; Famulok M
Nucleic Acids Res; 2007; 35(11):3713-22. PubMed ID: 17517779
[TBL] [Abstract][Full Text] [Related]
7. Identification and characterisation of thiamine pyrophosphate (TPP) riboswitch in Elaeis guineensis.
Subki A; Ho CL; Ismail NFN; Zainal Abidin AA; Balia Yusof ZN
PLoS One; 2020; 15(7):e0235431. PubMed ID: 32726320
[TBL] [Abstract][Full Text] [Related]
8. Comparative genomic analysis of fungal TPP-riboswitches.
Moldovan MA; Petrova SA; Gelfand MS
Fungal Genet Biol; 2018 May; 114():34-41. PubMed ID: 29548845
[TBL] [Abstract][Full Text] [Related]
9. Folding energy landscape of the thiamine pyrophosphate riboswitch aptamer.
Anthony PC; Perez CF; García-García C; Block SM
Proc Natl Acad Sci U S A; 2012 Jan; 109(5):1485-9. PubMed ID: 22219369
[TBL] [Abstract][Full Text] [Related]
10. Unraveling RNA dynamical behavior of TPP riboswitches: a comparison between Escherichia coli and Arabidopsis thaliana.
Antunes D; Jorge NAN; Garcia de Souza Costa M; Passetti F; Caffarena ER
Sci Rep; 2019 Mar; 9(1):4197. PubMed ID: 30862893
[TBL] [Abstract][Full Text] [Related]
11. Ligand-induced folding of the thiM TPP riboswitch investigated by a structure-based fluorescence spectroscopic approach.
Lang K; Rieder R; Micura R
Nucleic Acids Res; 2007; 35(16):5370-8. PubMed ID: 17693433
[TBL] [Abstract][Full Text] [Related]
12. Molecular level insights into the inhibition of gene expression by thiamine pyrophosphate (TPP) analogs for TPP riboswitch: A well-tempered metadynamics simulations study.
Wakchaure PD; Ganguly B
J Mol Graph Model; 2021 May; 104():107849. PubMed ID: 33545607
[TBL] [Abstract][Full Text] [Related]
13. Phosphate-group recognition by the aptamer domain of the thiamine pyrophosphate sensing riboswitch.
Noeske J; Richter C; Stirnal E; Schwalbe H; Wöhnert J
Chembiochem; 2006 Sep; 7(9):1451-6. PubMed ID: 16871614
[TBL] [Abstract][Full Text] [Related]
14. Thiamine pyrophosphate riboswitches are targets for the antimicrobial compound pyrithiamine.
Sudarsan N; Cohen-Chalamish S; Nakamura S; Emilsson GM; Breaker RR
Chem Biol; 2005 Dec; 12(12):1325-35. PubMed ID: 16356850
[TBL] [Abstract][Full Text] [Related]
15. Observation of long-range tertiary interactions during ligand binding by the TPP riboswitch aptamer.
Duesterberg VK; Fischer-Hwang IT; Perez CF; Hogan DW; Block SM
Elife; 2015 Dec; 4():. PubMed ID: 26709838
[TBL] [Abstract][Full Text] [Related]
16. Riboswitch-dependent gene regulation and its evolution in the plant kingdom.
Bocobza S; Adato A; Mandel T; Shapira M; Nudler E; Aharoni A
Genes Dev; 2007 Nov; 21(22):2874-9. PubMed ID: 18006684
[TBL] [Abstract][Full Text] [Related]
17. Exploring the structure, function of thiamine pyrophosphate riboswitch, and designing small molecules for antibacterial activity.
Wakchaure PD; Ganguly B
Wiley Interdiscip Rev RNA; 2023; 14(4):e1774. PubMed ID: 36594112
[TBL] [Abstract][Full Text] [Related]
18. Folding and ligand recognition of the TPP riboswitch aptamer at single-molecule resolution.
Haller A; Altman RB; Soulière MF; Blanchard SC; Micura R
Proc Natl Acad Sci U S A; 2013 Mar; 110(11):4188-93. PubMed ID: 23440214
[TBL] [Abstract][Full Text] [Related]
19.
Vargas-Junior V; Antunes D; Guimarães AC; Caffarena E
RNA Biol; 2022; 19(1):90-103. PubMed ID: 34989318
[TBL] [Abstract][Full Text] [Related]
20. TPP Riboswitch Populates
Kumar S; Reddy G
J Phys Chem B; 2022 Mar; 126(12):2369-2381. PubMed ID: 35298161
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]