These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

55 related articles for article (PubMed ID: 25258092)

  • 1. Exploring the sequence context of phosphorylatable amino acids: the contribution of the upgraded MAPRes tool.
    Iqbal Z; Hoessli DC; Qazi WM; Ahmad M; Shakoori AR; Nasir-ud-Din
    J Cell Biochem; 2015 Mar; 116(3):370-9. PubMed ID: 25258092
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Influence of the sequence environment and properties of neighboring amino acids on amino-acetylation: relevance for structure-function analysis.
    Iqbal Z; Hoessli DC; Kaleem A; Munir J; Saleem M; Afzal I; Shakoori AR; Nasir-Ud-Din
    J Cell Biochem; 2013 Apr; 114(4):874-87. PubMed ID: 23097243
    [TBL] [Abstract][Full Text] [Related]  

  • 3. MAPRes: Mining association patterns among preferred amino acid residues in the vicinity of amino acids targeted for post-translational modifications.
    Ahmad I; Qazi WM; Khurshid A; Ahmad M; Hoessli DC; Khawaja I; Choudhary MI; Shakoori AR;
    Proteomics; 2008 May; 8(10):1954-8. PubMed ID: 18491291
    [TBL] [Abstract][Full Text] [Related]  

  • 4. MAPRes: an efficient method to analyze protein sequence around post-translational modification sites.
    Ahmad I; Hoessli DC; Qazi WM; Khurshid A; Mehmood A; Walker-Nasir E; Ahmad M; Shakoori AR;
    J Cell Biochem; 2008 Jul; 104(4):1220-31. PubMed ID: 18286469
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Phosphoproteome sequence analysis and significance: mining association patterns around phosphorylation sites utilizing MAPRes.
    Ahmad I; Mehmood A; Khurshid A; Qazi WM; Hoessli DC; Walker-Nasir E; Shakoori AR;
    J Cell Biochem; 2009 Sep; 108(1):64-74. PubMed ID: 19544398
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Prediction of pupylation sites using the composition of k-spaced amino acid pairs.
    Tung CW
    J Theor Biol; 2013 Nov; 336():11-7. PubMed ID: 23871866
    [TBL] [Abstract][Full Text] [Related]  

  • 7. PKCdelta-mediated IRS-1 Ser24 phosphorylation negatively regulates IRS-1 function.
    Greene MW; Ruhoff MS; Roth RA; Kim JA; Quon MJ; Krause JA
    Biochem Biophys Res Commun; 2006 Oct; 349(3):976-86. PubMed ID: 16970908
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Phosphorylation and glycosylation interplay: protein modifications at hydroxy amino acids and prediction of signaling functions of the human beta3 integrin family.
    Ahmad I; Hoessli DC; Walker-Nasir E; Choudhary MI; Rafik SM; Shakoori AR;
    J Cell Biochem; 2006 Oct; 99(3):706-18. PubMed ID: 16676352
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Serine phosphorylation proximal to its phosphotyrosine binding domain inhibits insulin receptor substrate 1 function and promotes insulin resistance.
    Liu YF; Herschkovitz A; Boura-Halfon S; Ronen D; Paz K; Leroith D; Zick Y
    Mol Cell Biol; 2004 Nov; 24(21):9668-81. PubMed ID: 15485932
    [TBL] [Abstract][Full Text] [Related]  

  • 10. In vitro phosphorylation of insulin receptor substrate 1 by protein kinase C-zeta: functional analysis and identification of novel phosphorylation sites.
    Sommerfeld MR; Metzger S; Stosik M; Tennagels N; Eckel J
    Biochemistry; 2004 May; 43(19):5888-901. PubMed ID: 15134463
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Exploring the charge space of protein-protein association: a proteomic study.
    Shaul Y; Schreiber G
    Proteins; 2005 Aug; 60(3):341-52. PubMed ID: 15887221
    [TBL] [Abstract][Full Text] [Related]  

  • 12. dbPTM: an information repository of protein post-translational modification.
    Lee TY; Huang HD; Hung JH; Huang HY; Yang YS; Wang TH
    Nucleic Acids Res; 2006 Jan; 34(Database issue):D622-7. PubMed ID: 16381945
    [TBL] [Abstract][Full Text] [Related]  

  • 13. AutoMotif server: prediction of single residue post-translational modifications in proteins.
    Plewczynski D; Tkacz A; Wyrwicz LS; Rychlewski L
    Bioinformatics; 2005 May; 21(10):2525-7. PubMed ID: 15728119
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Identification of insulin receptor substrate 1 serine/threonine phosphorylation sites using mass spectrometry analysis: regulatory role of serine 1223.
    Luo M; Reyna S; Wang L; Yi Z; Carroll C; Dong LQ; Langlais P; Weintraub ST; Mandarino LJ
    Endocrinology; 2005 Oct; 146(10):4410-6. PubMed ID: 16020478
    [TBL] [Abstract][Full Text] [Related]  

  • 15. VEMS 3.0: algorithms and computational tools for tandem mass spectrometry based identification of post-translational modifications in proteins.
    Matthiesen R; Trelle MB; Højrup P; Bunkenborg J; Jensen ON
    J Proteome Res; 2005; 4(6):2338-47. PubMed ID: 16335983
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Incorporating post-translational modifications and unnatural amino acids into high-throughput modeling of protein structures.
    Nagata K; Randall A; Baldi P
    Bioinformatics; 2014 Jun; 30(12):1681-9. PubMed ID: 24574112
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Reproducible Analysis of Post-Translational Modifications in Proteomes--Application to Human Mutations.
    Holehouse AS; Naegle KM
    PLoS One; 2015; 10(12):e0144692. PubMed ID: 26659599
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Prediction of posttranslational modification of proteins from their amino acid sequence.
    Eisenhaber B; Eisenhaber F
    Methods Mol Biol; 2010; 609():365-84. PubMed ID: 20221930
    [TBL] [Abstract][Full Text] [Related]  

  • 19. The Diamond STING server.
    Neshich G; Borro LC; Higa RH; Kuser PR; Yamagishi ME; Franco EH; Krauchenco JN; Fileto R; Ribeiro AA; Bezerra GB; Velludo TM; Jimenez TS; Furukawa N; Teshima H; Kitajima K; Bava A; Sarai A; Togawa RC; Mancini AL
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W29-35. PubMed ID: 15980473
    [TBL] [Abstract][Full Text] [Related]  

  • 20. The importance of intrinsic disorder for protein phosphorylation.
    Iakoucheva LM; Radivojac P; Brown CJ; O'Connor TR; Sikes JG; Obradovic Z; Dunker AK
    Nucleic Acids Res; 2004; 32(3):1037-49. PubMed ID: 14960716
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 3.