163 related articles for article (PubMed ID: 25265982)
1. MAE-FMD: multi-agent evolutionary method for functional module detection in protein-protein interaction networks.
Ji JZ; Jiao L; Yang CC; Lv JW; Zhang AD
BMC Bioinformatics; 2014 Sep; 15(1):325. PubMed ID: 25265982
[TBL] [Abstract][Full Text] [Related]
2. Detecting Functional Modules Based on a Multiple-Grain Model in Large-Scale Protein-Protein Interaction Networks.
Ji J; Lv J; Yang C; Zhang A
IEEE/ACM Trans Comput Biol Bioinform; 2016; 13(4):610-22. PubMed ID: 26394434
[TBL] [Abstract][Full Text] [Related]
3. Identification of functional hubs and modules by converting interactome networks into hierarchical ordering of proteins.
Cho YR; Zhang A
BMC Bioinformatics; 2010 Apr; 11 Suppl 3(Suppl 3):S3. PubMed ID: 20438650
[TBL] [Abstract][Full Text] [Related]
4. MOEPGA: A novel method to detect protein complexes in yeast protein-protein interaction networks based on MultiObjective Evolutionary Programming Genetic Algorithm.
Cao B; Luo J; Liang C; Wang S; Song D
Comput Biol Chem; 2015 Oct; 58():173-81. PubMed ID: 26298638
[TBL] [Abstract][Full Text] [Related]
5. Detection of functional modules from protein interaction networks with an enhanced random walk based algorithm.
Cai B; Wang H; Zheng H; Wang H
Int J Comput Biol Drug Des; 2011; 4(3):290-306. PubMed ID: 21778561
[TBL] [Abstract][Full Text] [Related]
6. Prior knowledge based mining functional modules from Yeast PPI networks with gene ontology.
Jing L; Ng MK
BMC Bioinformatics; 2010 Dec; 11 Suppl 11(Suppl 11):S3. PubMed ID: 21172053
[TBL] [Abstract][Full Text] [Related]
7. Efficient and accurate Greedy Search Methods for mining functional modules in protein interaction networks.
He J; Li C; Ye B; Zhong W
BMC Bioinformatics; 2012 Jun; 13 Suppl 10(Suppl 10):S19. PubMed ID: 22759424
[TBL] [Abstract][Full Text] [Related]
8. Discovering protein complexes in protein interaction networks via exploring the weak ties effect.
Ma X; Gao L
BMC Syst Biol; 2012; 6 Suppl 1(Suppl 1):S6. PubMed ID: 23046740
[TBL] [Abstract][Full Text] [Related]
9. Evolutionary Model Selection and Parameter Estimation for Protein-Protein Interaction Network Based on Differential Evolution Algorithm.
Huang L; Liao L; Wu CH
IEEE/ACM Trans Comput Biol Bioinform; 2015; 12(3):622-31. PubMed ID: 26357273
[TBL] [Abstract][Full Text] [Related]
10. k-Partite cliques of protein interactions: A novel subgraph topology for functional coherence analysis on PPI networks.
Liu Q; Chen YP; Li J
J Theor Biol; 2014 Jan; 340():146-54. PubMed ID: 24056214
[TBL] [Abstract][Full Text] [Related]
11. Joint clustering of protein interaction networks through Markov random walk.
Wang Y; Qian X
BMC Syst Biol; 2014; 8 Suppl 1(Suppl 1):S9. PubMed ID: 24565376
[TBL] [Abstract][Full Text] [Related]
12. Towards the identification of protein complexes and functional modules by integrating PPI network and gene expression data.
Li M; Wu X; Wang J; Pan Y
BMC Bioinformatics; 2012 May; 13():109. PubMed ID: 22621308
[TBL] [Abstract][Full Text] [Related]
13. Functional module identification in protein interaction networks by interaction patterns.
Wang Y; Qian X
Bioinformatics; 2014 Jan; 30(1):81-93. PubMed ID: 24085567
[TBL] [Abstract][Full Text] [Related]
14. A methodology for detecting the orthology signal in a PPI network at a functional complex level.
Jancura P; Mavridou E; Carrillo-de Santa Pau E; Marchiori E
BMC Bioinformatics; 2012 Jun; 13 Suppl 10(Suppl 10):S18. PubMed ID: 22759423
[TBL] [Abstract][Full Text] [Related]
15. Network simulation reveals significant contribution of network motifs to the age-dependency of yeast protein-protein interaction networks.
Liang C; Luo J; Song D
Mol Biosyst; 2014 Jul; 10(9):2277-88. PubMed ID: 24964354
[TBL] [Abstract][Full Text] [Related]
16. LePrimAlign: local entropy-based alignment of PPI networks to predict conserved modules.
Maskey S; Cho YR
BMC Genomics; 2019 Dec; 20(Suppl 9):964. PubMed ID: 31874635
[TBL] [Abstract][Full Text] [Related]
17. Incorporating topological information for predicting robust cancer subnetwork markers in human protein-protein interaction network.
Khunlertgit N; Yoon BJ
BMC Bioinformatics; 2016 Oct; 17(Suppl 13):351. PubMed ID: 27766944
[TBL] [Abstract][Full Text] [Related]
18. Detecting protein complexes in a PPI network: a gene ontology based multi-objective evolutionary approach.
Mukhopadhyay A; Ray S; De M
Mol Biosyst; 2012 Nov; 8(11):3036-48. PubMed ID: 22990765
[TBL] [Abstract][Full Text] [Related]
19. A novel subgradient-based optimization algorithm for blockmodel functional module identification.
Wang Y; Qian X
BMC Bioinformatics; 2013; 14 Suppl 2(Suppl 2):S23. PubMed ID: 23368964
[TBL] [Abstract][Full Text] [Related]
20. SiPAN: simultaneous prediction and alignment of protein-protein interaction networks.
Alkan F; Erten C
Bioinformatics; 2015 Jul; 31(14):2356-63. PubMed ID: 25788620
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]