These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
213 related articles for article (PubMed ID: 25273503)
1. CSI 2.0: a significantly improved version of the Chemical Shift Index. Hafsa NE; Wishart DS J Biomol NMR; 2014 Nov; 60(2-3):131-46. PubMed ID: 25273503 [TBL] [Abstract][Full Text] [Related]
2. CSI 3.0: a web server for identifying secondary and super-secondary structure in proteins using NMR chemical shifts. Hafsa NE; Arndt D; Wishart DS Nucleic Acids Res; 2015 Jul; 43(W1):W370-7. PubMed ID: 25979265 [TBL] [Abstract][Full Text] [Related]
3. SHIFTX2: significantly improved protein chemical shift prediction. Han B; Liu Y; Ginzinger SW; Wishart DS J Biomol NMR; 2011 May; 50(1):43-57. PubMed ID: 21448735 [TBL] [Abstract][Full Text] [Related]
4. EFG-CS: Predicting chemical shifts from amino acid sequences with protein structure prediction using machine learning and deep learning models. Gu X; Myung Y; Rodrigues CHM; Ascher DB Protein Sci; 2024 Aug; 33(8):e5096. PubMed ID: 38979954 [TBL] [Abstract][Full Text] [Related]
5. Accurate prediction of protein torsion angles using chemical shifts and sequence homology. Neal S; Berjanskii M; Zhang H; Wishart DS Magn Reson Chem; 2006 Jul; 44 Spec No():S158-67. PubMed ID: 16823900 [TBL] [Abstract][Full Text] [Related]
6. Practical use of chemical shift databases for protein solid-state NMR: 2D chemical shift maps and amino-acid assignment with secondary-structure information. Fritzsching KJ; Yang Y; Schmidt-Rohr K; Hong M J Biomol NMR; 2013 Jun; 56(2):155-67. PubMed ID: 23625364 [TBL] [Abstract][Full Text] [Related]
7. Toward direct determination of conformations of protein building units from multidimensional NMR experiments VI: chemical shift analysis of his to gain 3D structure and protonation state information. Hudáky P; Perczel A J Comput Chem; 2005 Oct; 26(13):1307-17. PubMed ID: 15999335 [TBL] [Abstract][Full Text] [Related]
8. Nearest-neighbor effects on backbone alpha and beta carbon chemical shifts in proteins. Wang L; Eghbalnia HR; Markley JL J Biomol NMR; 2007 Nov; 39(3):247-57. PubMed ID: 17899393 [TBL] [Abstract][Full Text] [Related]
9. Accurate and automated classification of protein secondary structure with PsiCSI. Hung LH; Samudrala R Protein Sci; 2003 Feb; 12(2):288-95. PubMed ID: 12538892 [TBL] [Abstract][Full Text] [Related]
10. Accessible surface area from NMR chemical shifts. Hafsa NE; Arndt D; Wishart DS J Biomol NMR; 2015 Jul; 62(3):387-401. PubMed ID: 26078090 [TBL] [Abstract][Full Text] [Related]
11. Automated amino acid side-chain NMR assignment of proteins using (13)C- and (15)N-resolved 3D [ (1)H, (1)H]-NOESY. Fiorito F; Herrmann T; Damberger FF; Wüthrich K J Biomol NMR; 2008 Sep; 42(1):23-33. PubMed ID: 18709333 [TBL] [Abstract][Full Text] [Related]
12. A simple method to adjust inconsistently referenced 13C and 15N chemical shift assignments of proteins. Wang Y; Wishart DS J Biomol NMR; 2005 Feb; 31(2):143-8. PubMed ID: 15772753 [TBL] [Abstract][Full Text] [Related]
13. Rapid and reliable protein structure determination via chemical shift threading. Hafsa NE; Berjanskii MV; Arndt D; Wishart DS J Biomol NMR; 2018 Jan; 70(1):33-51. PubMed ID: 29196969 [TBL] [Abstract][Full Text] [Related]
14. NMR structural and dynamic characterization of the acid-unfolded state of apomyoglobin provides insights into the early events in protein folding. Yao J; Chung J; Eliezer D; Wright PE; Dyson HJ Biochemistry; 2001 Mar; 40(12):3561-71. PubMed ID: 11297422 [TBL] [Abstract][Full Text] [Related]
15. Rapid and accurate calculation of protein 1H, 13C and 15N chemical shifts. Neal S; Nip AM; Zhang H; Wishart DS J Biomol NMR; 2003 Jul; 26(3):215-40. PubMed ID: 12766419 [TBL] [Abstract][Full Text] [Related]
16. CSI-LSTM: a web server to predict protein secondary structure using bidirectional long short term memory and NMR chemical shifts. Miao Z; Wang Q; Xiao X; Kamal GM; Song L; Zhang X; Li C; Zhou X; Jiang B; Liu M J Biomol NMR; 2021 Dec; 75(10-12):393-400. PubMed ID: 34510297 [TBL] [Abstract][Full Text] [Related]
17. Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA. Herrmann T; Güntert P; Wüthrich K J Mol Biol; 2002 May; 319(1):209-27. PubMed ID: 12051947 [TBL] [Abstract][Full Text] [Related]
18. CS23D: a web server for rapid protein structure generation using NMR chemical shifts and sequence data. Wishart DS; Arndt D; Berjanskii M; Tang P; Zhou J; Lin G Nucleic Acids Res; 2008 Jul; 36(Web Server issue):W496-502. PubMed ID: 18515350 [TBL] [Abstract][Full Text] [Related]
19. Accurate measurements of the effects of deuteration at backbone amide positions on the chemical shifts of ¹⁵N, ¹³Cα, ¹³Cβ, ¹³CO and ¹Hα nuclei in proteins. Zhang D; Tugarinov V J Biomol NMR; 2013 Jun; 56(2):169-82. PubMed ID: 23612994 [TBL] [Abstract][Full Text] [Related]
20. Secondary structural effects on protein NMR chemical shifts. Wang Y J Biomol NMR; 2004 Nov; 30(3):233-44. PubMed ID: 15754052 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]