178 related articles for article (PubMed ID: 25279564)
1. Protein NMR structures refined without NOE data.
Ryu H; Kim TR; Ahn S; Ji S; Lee J
PLoS One; 2014; 9(10):e108888. PubMed ID: 25279564
[TBL] [Abstract][Full Text] [Related]
2. STAP Refinement of the NMR database: a database of 2405 refined solution NMR structures.
Yang JS; Kim JH; Oh S; Han G; Lee S; Lee J
Nucleic Acids Res; 2012 Jan; 40(Database issue):D525-30. PubMed ID: 22102572
[TBL] [Abstract][Full Text] [Related]
3. NMRe: a web server for NMR protein structure refinement with high-quality structure validation scores.
Ryu H; Lim G; Sung BH; Lee J
Bioinformatics; 2016 Feb; 32(4):611-3. PubMed ID: 26504145
[TBL] [Abstract][Full Text] [Related]
4. Nuclear magnetic resonance solution structure of the Arc repressor using relaxation matrix calculations.
Bonvin AM; Vis H; Breg JN; Burgering MJ; Boelens R; Kaptein R
J Mol Biol; 1994 Feb; 236(1):328-41. PubMed ID: 8107113
[TBL] [Abstract][Full Text] [Related]
5. The AUDANA algorithm for automated protein 3D structure determination from NMR NOE data.
Lee W; Petit CM; Cornilescu G; Stark JL; Markley JL
J Biomol NMR; 2016 Jun; 65(2):51-7. PubMed ID: 27169728
[TBL] [Abstract][Full Text] [Related]
6. Knowledge-based versus experimentally acquired distance and angle constraints for NMR structure refinement.
Cui F; Jernigan R; Wu Z
J Bioinform Comput Biol; 2008 Apr; 6(2):283-300. PubMed ID: 18464323
[TBL] [Abstract][Full Text] [Related]
7. Direct NOE refinement of biomolecular structures using 2D NMR data.
Bonvin AM; Boelens R; Kaptein R
J Biomol NMR; 1991 Sep; 1(3):305-9. PubMed ID: 1841701
[TBL] [Abstract][Full Text] [Related]
8. Validation of the use of intermolecular NOE constraints for obtaining docked structures of protein-ligand complexes.
Gradwell MJ; Feeney J
J Biomol NMR; 1996 Jan; 7(1):48-58. PubMed ID: 8720831
[TBL] [Abstract][Full Text] [Related]
9. Refinement of NMR-determined protein structures with database derived distance constraints.
Cui F; Jernigan R; Wu Z
J Bioinform Comput Biol; 2005 Dec; 3(6):1315-29. PubMed ID: 16374909
[TBL] [Abstract][Full Text] [Related]
10. Refinement of NMR-determined protein structures with database derived mean-force potentials.
Wu D; Jernigan R; Wu Z
Proteins; 2007 Jul; 68(1):232-42. PubMed ID: 17387736
[TBL] [Abstract][Full Text] [Related]
11. Evaluating the quality of NMR structures by local density of protons.
Ban YE; Rudolph J; Zhou P; Edelsbrunner H
Proteins; 2006 Mar; 62(4):852-64. PubMed ID: 16342274
[TBL] [Abstract][Full Text] [Related]
12. Complete relaxation matrix refinement of NMR structures of proteins using analytically calculated dihedral angle derivatives of NOE intensities.
Mertz JE; Güntert P; Wüthrich K; Braun W
J Biomol NMR; 1991 Sep; 1(3):257-69. PubMed ID: 1841698
[TBL] [Abstract][Full Text] [Related]
13. REDCRAFT: A computational platform using residual dipolar coupling NMR data for determining structures of perdeuterated proteins in solution.
Cole CA; Daigham NS; Liu G; Montelione GT; Valafar H
PLoS Comput Biol; 2021 Feb; 17(2):e1008060. PubMed ID: 33524015
[TBL] [Abstract][Full Text] [Related]
14. Comparing atomistic simulation data with the NMR experiment: how much can NOEs actually tell us?
Zagrovic B; van Gunsteren WF
Proteins; 2006 Apr; 63(1):210-8. PubMed ID: 16425239
[TBL] [Abstract][Full Text] [Related]
15. Improved technologies now routinely provide protein NMR structures useful for molecular replacement.
Mao B; Guan R; Montelione GT
Structure; 2011 Jun; 19(6):757-66. PubMed ID: 21645849
[TBL] [Abstract][Full Text] [Related]
16. Improving the quality of NMR and crystallographic protein structures by means of a conformational database potential derived from structure databases.
Kuszewski J; Gronenborn AM; Clore GM
Protein Sci; 1996 Jun; 5(6):1067-80. PubMed ID: 8762138
[TBL] [Abstract][Full Text] [Related]
17. Improving Geometric Validation Metrics and Ensuring Consistency with Experimental Data through TrioSA: An NMR Refinement Protocol.
Cho Y; Ryu H; Lim G; Nam S; Lee J
Int J Mol Sci; 2023 Aug; 24(17):. PubMed ID: 37686144
[TBL] [Abstract][Full Text] [Related]
18. Improving NMR protein structure quality by Rosetta refinement: a molecular replacement study.
Ramelot TA; Raman S; Kuzin AP; Xiao R; Ma LC; Acton TB; Hunt JF; Montelione GT; Baker D; Kennedy MA
Proteins; 2009 Apr; 75(1):147-67. PubMed ID: 18816799
[TBL] [Abstract][Full Text] [Related]
19. The solution structure of bovine ferricytochrome b5 determined using heteronuclear NMR methods.
Muskett FW; Kelly GP; Whitford D
J Mol Biol; 1996 Apr; 258(1):172-89. PubMed ID: 8613986
[TBL] [Abstract][Full Text] [Related]
20. An algebraic geometry approach to protein structure determination from NMR data.
Wang L; Mettu RR; Donald BR
Proc IEEE Comput Syst Bioinform Conf; 2005; ():235-46. PubMed ID: 16447981
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
