These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
2. Opioid receptors: Structural and mechanistic insights into pharmacology and signaling. Shang Y; Filizola M Eur J Pharmacol; 2015 Sep; 763(Pt B):206-13. PubMed ID: 25981301 [TBL] [Abstract][Full Text] [Related]
3. Usefulness and limitations of normal mode analysis in modeling dynamics of biomolecular complexes. Ma J Structure; 2005 Mar; 13(3):373-80. PubMed ID: 15766538 [TBL] [Abstract][Full Text] [Related]
4. A Multiscale Computational Model for Simulating the Kinetics of Protein Complex Assembly. Chen J; Wu Y Methods Mol Biol; 2018; 1764():401-411. PubMed ID: 29605930 [TBL] [Abstract][Full Text] [Related]
5. Structural models for dimerization of G-protein coupled receptors: the opioid receptor homodimers. Filizola M; Weinstein H Biopolymers; 2002; 66(5):317-25. PubMed ID: 12539260 [TBL] [Abstract][Full Text] [Related]
6. Conformation-activity relationships of opioid peptides with selective activities at opioid receptors. Hruby VJ; Agnes RS Biopolymers; 1999; 51(6):391-410. PubMed ID: 10797229 [TBL] [Abstract][Full Text] [Related]
7. Large, dynamic, multi-protein complexes: a challenge for structural biology. Różycki B; Boura E J Phys Condens Matter; 2014 Nov; 26(46):463103. PubMed ID: 25335513 [TBL] [Abstract][Full Text] [Related]
8. Molecular modeling study of the opioid receptor interactions with series of cyclic deltorphin analogues. Slusarz MJ J Pept Sci; 2011 Aug; 17(8):554-64. PubMed ID: 21538712 [TBL] [Abstract][Full Text] [Related]
9. Modeling the structural communication in supramolecular complexes involving GPCRs. Fanelli F Methods Mol Biol; 2012; 914():319-36. PubMed ID: 22976036 [TBL] [Abstract][Full Text] [Related]
10. Insights into the function of opioid receptors from molecular dynamics simulations of available crystal structures. Marino KA; Shang Y; Filizola M Br J Pharmacol; 2018 Jul; 175(14):2834-2845. PubMed ID: 28266020 [TBL] [Abstract][Full Text] [Related]
12. Preferred supramolecular organization and dimer interfaces of opioid receptors from simulated self-association. Provasi D; Boz MB; Johnston JM; Filizola M PLoS Comput Biol; 2015 Mar; 11(3):e1004148. PubMed ID: 25822938 [TBL] [Abstract][Full Text] [Related]
13. Toward High-Throughput Predictive Modeling of Protein Binding/Unbinding Kinetics. Chiu SH; Xie L J Chem Inf Model; 2016 Jun; 56(6):1164-74. PubMed ID: 27159844 [TBL] [Abstract][Full Text] [Related]
14. Accuracy of binding mode prediction with a cascadic stochastic tunneling method. Fischer B; Basili S; Merlitz H; Wenzel W Proteins; 2007 Jul; 68(1):195-204. PubMed ID: 17427957 [TBL] [Abstract][Full Text] [Related]
15. Flexible relaxation of rigid-body docking solutions. Król M; Tournier AL; Bates PA Proteins; 2007 Jul; 68(1):159-69. PubMed ID: 17397060 [TBL] [Abstract][Full Text] [Related]
16. Monitoring opioid receptor dimerization in living cells by bioluminescence resonance energy transfer (BRET). Baiula M Methods Mol Biol; 2015; 1230():105-13. PubMed ID: 25293319 [TBL] [Abstract][Full Text] [Related]
17. Coarse-graining of protein structures for the normal mode studies. Eom K; Baek SC; Ahn JH; Na S J Comput Chem; 2007 Jun; 28(8):1400-10. PubMed ID: 17330878 [TBL] [Abstract][Full Text] [Related]
18. Bridging molecular docking to membrane molecular dynamics to investigate GPCR-ligand recognition: the human A₂A adenosine receptor as a key study. Sabbadin D; Ciancetta A; Moro S J Chem Inf Model; 2014 Jan; 54(1):169-83. PubMed ID: 24359090 [TBL] [Abstract][Full Text] [Related]
19. Estimation of kinetic and thermodynamic ligand-binding parameters using computational strategies. Deganutti G; Moro S Future Med Chem; 2017 Apr; 9(5):507-523. PubMed ID: 28362130 [TBL] [Abstract][Full Text] [Related]
20. BDT: an easy-to-use front-end application for automation of massive docking tasks and complex docking strategies with AutoDock. Vaqué M; Arola A; Aliagas C; Pujadas G Bioinformatics; 2006 Jul; 22(14):1803-4. PubMed ID: 16720587 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]