BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

135 related articles for article (PubMed ID: 25323418)

  • 1. Nucleation free-energy barriers with Hybrid Monte-Carlo/Umbrella Sampling.
    Gonzalez MA; Sanz E; McBride C; Abascal JL; Vega C; Valeriani C
    Phys Chem Chem Phys; 2014 Dec; 16(45):24913-9. PubMed ID: 25323418
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Crystal nucleation of colloidal hard dumbbells.
    Ni R; Dijkstra M
    J Chem Phys; 2011 Jan; 134(3):034501. PubMed ID: 21261362
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Thermodynamics of coupled protein adsorption and stability using hybrid Monte Carlo simulations.
    Zhong ED; Shirts MR
    Langmuir; 2014 May; 30(17):4952-61. PubMed ID: 24716898
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Two-step vapor-crystal nucleation close below triple point.
    van Meel JA; Page AJ; Sear RP; Frenkel D
    J Chem Phys; 2008 Nov; 129(20):204505. PubMed ID: 19045871
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Thermodynamics and kinetics of bubble nucleation: simulation methodology.
    Meadley SL; Escobedo FA
    J Chem Phys; 2012 Aug; 137(7):074109. PubMed ID: 22920105
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A new Hybrid Monte Carlo algorithm for protein potential function test and structure refinement.
    Zhang H
    Proteins; 1999 Mar; 34(4):464-71. PubMed ID: 10081959
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Constrained Hybrid Monte Carlo Sampling Made Simple for Chemical Reaction Simulations.
    Jin B; Hu T; Yu K; Xu S
    J Chem Theory Comput; 2023 Oct; 19(20):7343-7357. PubMed ID: 37793028
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A separable shadow Hamiltonian hybrid Monte Carlo method.
    Sweet CR; Hampton SS; Skeel RD; Izaguirre JA
    J Chem Phys; 2009 Nov; 131(17):174106. PubMed ID: 19894997
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Computing free energy barriers for the nucleation of complex network mesophases.
    Mukhtyar AJ; Escobedo FA
    J Chem Phys; 2022 Jan; 156(3):034502. PubMed ID: 35065574
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Free energy landscapes for homogeneous nucleation of ice for a monatomic water model.
    Reinhardt A; Doye JP
    J Chem Phys; 2012 Feb; 136(5):054501. PubMed ID: 22320745
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Bennett's acceptance ratio and histogram analysis methods enhanced by umbrella sampling along a reaction coordinate in configurational space.
    Kim I; Allen TW
    J Chem Phys; 2012 Apr; 136(16):164103. PubMed ID: 22559466
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Bubble nucleation in simple and molecular liquids via the largest spherical cavity method.
    Gonzalez MA; Abascal JL; Valeriani C; Bresme F
    J Chem Phys; 2015 Apr; 142(15):154903. PubMed ID: 25903906
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Enhanced configurational sampling with hybrid non-equilibrium molecular dynamics-Monte Carlo propagator.
    Suh D; Radak BK; Chipot C; Roux B
    J Chem Phys; 2018 Jan; 148(1):014101. PubMed ID: 29306299
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Generalized Metropolis acceptance criterion for hybrid non-equilibrium molecular dynamics-Monte Carlo simulations.
    Chen Y; Roux B
    J Chem Phys; 2015 Jan; 142(2):024101. PubMed ID: 25591332
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The crystal-fluid interfacial free energy and nucleation rate of NaCl from different simulation methods.
    Espinosa JR; Vega C; Valeriani C; Sanz E
    J Chem Phys; 2015 May; 142(19):194709. PubMed ID: 26001475
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Molecular simulation of bundle-like crystal nucleation from n-eicosane melts.
    Yi P; Rutledge GC
    J Chem Phys; 2011 Jul; 135(2):024903. PubMed ID: 21766967
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Numerical calculation of free-energy barriers for entangled polymer nucleation.
    Tang X; Tian F; Xu T; Li L; Reinhardt A
    J Chem Phys; 2020 Jun; 152(22):224904. PubMed ID: 32534553
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Development of a generalized hybrid Monte Carlo algorithm to generate the multicanonical ensemble with applications to molecular systems.
    Mukuta N; Miura S
    J Chem Phys; 2018 Aug; 149(7):072322. PubMed ID: 30134718
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Nested sampling in the canonical ensemble: direct calculation of the partition function from NVT trajectories.
    Nielsen SO
    J Chem Phys; 2013 Sep; 139(12):124104. PubMed ID: 24089747
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A Novel Hybrid Monte Carlo Algorithm for Sampling Path Space.
    Pinski FJ
    Entropy (Basel); 2021 Apr; 23(5):. PubMed ID: 33922040
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.