These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

199 related articles for article (PubMed ID: 25350128)

  • 1. Quality evaluation of extracted ion chromatograms and chromatographic peaks in liquid chromatography/mass spectrometry-based metabolomics data.
    Zhang W; Zhao PX
    BMC Bioinformatics; 2014; 15 Suppl 11(Suppl 11):S5. PubMed ID: 25350128
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Detailed Investigation and Comparison of the XCMS and MZmine 2 Chromatogram Construction and Chromatographic Peak Detection Methods for Preprocessing Mass Spectrometry Metabolomics Data.
    Myers OD; Sumner SJ; Li S; Barnes S; Du X
    Anal Chem; 2017 Sep; 89(17):8689-8695. PubMed ID: 28752757
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Picky with peakpicking: assessing chromatographic peak quality with simple metrics in metabolomics.
    Kumler W; Hazelton BJ; Ingalls AE
    BMC Bioinformatics; 2023 Oct; 24(1):404. PubMed ID: 37891484
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Ion trace detection algorithm to extract pure ion chromatograms to improve untargeted peak detection quality for liquid chromatography/time-of-flight mass spectrometry-based metabolomics data.
    Wang SY; Kuo CH; Tseng YJ
    Anal Chem; 2015 Mar; 87(5):3048-55. PubMed ID: 25622715
    [TBL] [Abstract][Full Text] [Related]  

  • 5. MET-COFEA: a liquid chromatography/mass spectrometry data processing platform for metabolite compound feature extraction and annotation.
    Zhang W; Chang J; Lei Z; Huhman D; Sumner LW; Zhao PX
    Anal Chem; 2014 Jul; 86(13):6245-53. PubMed ID: 24856452
    [TBL] [Abstract][Full Text] [Related]  

  • 6. One Step Forward for Reducing False Positive and False Negative Compound Identifications from Mass Spectrometry Metabolomics Data: New Algorithms for Constructing Extracted Ion Chromatograms and Detecting Chromatographic Peaks.
    Myers OD; Sumner SJ; Li S; Barnes S; Du X
    Anal Chem; 2017 Sep; 89(17):8696-8703. PubMed ID: 28752754
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Strategies to avoid false negative findings in residue analysis using liquid chromatography coupled to time-of-flight mass spectrometry.
    Kaufmann A; Butcher P
    Rapid Commun Mass Spectrom; 2006; 20(23):3566-72. PubMed ID: 17091534
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Targeted quantitative bioanalysis in plasma using liquid chromatography/high-resolution accurate mass spectrometry: an evaluation of global selectivity as a function of mass resolving power and extraction window, with comparison of centroid and profile modes.
    Xia YQ; Lau J; Olah T; Jemal M
    Rapid Commun Mass Spectrom; 2011 Oct; 25(19):2863-78. PubMed ID: 21913265
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Data preprocessing method for liquid chromatography-mass spectrometry based metabolomics.
    Wei X; Shi X; Kim S; Zhang L; Patrick JS; Binkley J; McClain C; Zhang X
    Anal Chem; 2012 Sep; 84(18):7963-71. PubMed ID: 22931487
    [TBL] [Abstract][Full Text] [Related]  

  • 10. EVA: Evaluation of Metabolic Feature Fidelity Using a Deep Learning Model Trained With Over 25000 Extracted Ion Chromatograms.
    Guo J; Shen S; Xing S; Chen Y; Chen F; Porter EM; Yu H; Huan T
    Anal Chem; 2021 Sep; 93(36):12181-12186. PubMed ID: 34455775
    [TBL] [Abstract][Full Text] [Related]  

  • 11. True ion pick (TIPick): a denoising and peak picking algorithm to extract ion signals from liquid chromatography/mass spectrometry data.
    Ho TJ; Kuo CH; Wang SY; Chen GY; Tseng YJ
    J Mass Spectrom; 2013 Feb; 48(2):234-42. PubMed ID: 23378096
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Plant metabolomics: resolution and quantification of elusive peaks in liquid chromatography-mass spectrometry profiles of complex plant extracts using multi-way decomposition methods.
    Khakimov B; Amigo JM; Bak S; Engelsen SB
    J Chromatogr A; 2012 Nov; 1266():84-94. PubMed ID: 23107118
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Optimization of XCMS parameters for LC-MS metabolomics: an assessment of automated versus manual tuning and its effect on the final results.
    Albóniga OE; González O; Alonso RM; Xu Y; Goodacre R
    Metabolomics; 2020 Jan; 16(1):14. PubMed ID: 31925557
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Development of a Postcolumn Infused-Internal Standard Liquid Chromatography Mass Spectrometry Method for Quantitative Metabolomics Studies.
    Liao HW; Chen GY; Wu MS; Liao WC; Lin CH; Kuo CH
    J Proteome Res; 2017 Feb; 16(2):1097-1104. PubMed ID: 28067522
    [TBL] [Abstract][Full Text] [Related]  

  • 15. MetaClean: a machine learning-based classifier for reduced false positive peak detection in untargeted LC-MS metabolomics data.
    Chetnik K; Petrick L; Pandey G
    Metabolomics; 2020 Oct; 16(11):117. PubMed ID: 33085002
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Focused metabolomics using liquid chromatography/electrospray ionization tandem mass spectrometry for analysis of urinary conjugated cholesterol metabolites from patients with Niemann-Pick disease type C and 3β-hydroxysteroid dehydrogenase deficiency.
    Maekawa M; Shimada M; Ohno K; Togawa M; Nittono H; Iida T; Hofmann AF; Goto J; Yamaguchi H; Mano N
    Ann Clin Biochem; 2015 Sep; 52(Pt 5):576-87. PubMed ID: 25575700
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Second-order peak detection for multicomponent high-resolution LC/MS data.
    Stolt R; Torgrip RJ; Lindberg J; Csenki L; Kolmert J; Schuppe-Koistinen I; Jacobsson SP
    Anal Chem; 2006 Feb; 78(4):975-83. PubMed ID: 16478086
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Parametric studies of matched filters to enhance the signal-to-noise ratios of LC-MS-MS peaks.
    Wang SC; Chiang SM; Huang CM
    Anal Chim Acta; 2006 Jan; 556(1):201-7. PubMed ID: 17723350
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Extracting monoisotopic single-charge peaks from liquid chromatography-electrospray ionization-mass spectrometry.
    Matthiesen R
    Methods Mol Biol; 2007; 367():37-48. PubMed ID: 17185768
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A scoring approach for multi-platform acquisition in metabolomics.
    Pezzatti J; González-Ruiz V; Codesido S; Gagnebin Y; Joshi A; Guillarme D; Schappler J; Picard D; Boccard J; Rudaz S
    J Chromatogr A; 2019 May; 1592():47-54. PubMed ID: 30685186
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.