372 related articles for article (PubMed ID: 25373144)
1. Single haplotype assembly of the human genome from a hydatidiform mole.
Steinberg KM; Schneider VA; Graves-Lindsay TA; Fulton RS; Agarwala R; Huddleston J; Shiryev SA; Morgulis A; Surti U; Warren WC; Church DM; Eichler EE; Wilson RK
Genome Res; 2014 Dec; 24(12):2066-76. PubMed ID: 25373144
[TBL] [Abstract][Full Text] [Related]
2. The sequence of the human genome.
Venter JC; Adams MD; Myers EW; Li PW; Mural RJ; Sutton GG; Smith HO; Yandell M; Evans CA; Holt RA; Gocayne JD; Amanatides P; Ballew RM; Huson DH; Wortman JR; Zhang Q; Kodira CD; Zheng XH; Chen L; Skupski M; Subramanian G; Thomas PD; Zhang J; Gabor Miklos GL; Nelson C; Broder S; Clark AG; Nadeau J; McKusick VA; Zinder N; Levine AJ; Roberts RJ; Simon M; Slayman C; Hunkapiller M; Bolanos R; Delcher A; Dew I; Fasulo D; Flanigan M; Florea L; Halpern A; Hannenhalli S; Kravitz S; Levy S; Mobarry C; Reinert K; Remington K; Abu-Threideh J; Beasley E; Biddick K; Bonazzi V; Brandon R; Cargill M; Chandramouliswaran I; Charlab R; Chaturvedi K; Deng Z; Di Francesco V; Dunn P; Eilbeck K; Evangelista C; Gabrielian AE; Gan W; Ge W; Gong F; Gu Z; Guan P; Heiman TJ; Higgins ME; Ji RR; Ke Z; Ketchum KA; Lai Z; Lei Y; Li Z; Li J; Liang Y; Lin X; Lu F; Merkulov GV; Milshina N; Moore HM; Naik AK; Narayan VA; Neelam B; Nusskern D; Rusch DB; Salzberg S; Shao W; Shue B; Sun J; Wang Z; Wang A; Wang X; Wang J; Wei M; Wides R; Xiao C; Yan C; Yao A; Ye J; Zhan M; Zhang W; Zhang H; Zhao Q; Zheng L; Zhong F; Zhong W; Zhu S; Zhao S; Gilbert D; Baumhueter S; Spier G; Carter C; Cravchik A; Woodage T; Ali F; An H; Awe A; Baldwin D; Baden H; Barnstead M; Barrow I; Beeson K; Busam D; Carver A; Center A; Cheng ML; Curry L; Danaher S; Davenport L; Desilets R; Dietz S; Dodson K; Doup L; Ferriera S; Garg N; Gluecksmann A; Hart B; Haynes J; Haynes C; Heiner C; Hladun S; Hostin D; Houck J; Howland T; Ibegwam C; Johnson J; Kalush F; Kline L; Koduru S; Love A; Mann F; May D; McCawley S; McIntosh T; McMullen I; Moy M; Moy L; Murphy B; Nelson K; Pfannkoch C; Pratts E; Puri V; Qureshi H; Reardon M; Rodriguez R; Rogers YH; Romblad D; Ruhfel B; Scott R; Sitter C; Smallwood M; Stewart E; Strong R; Suh E; Thomas R; Tint NN; Tse S; Vech C; Wang G; Wetter J; Williams S; Williams M; Windsor S; Winn-Deen E; Wolfe K; Zaveri J; Zaveri K; Abril JF; Guigó R; Campbell MJ; Sjolander KV; Karlak B; Kejariwal A; Mi H; Lazareva B; Hatton T; Narechania A; Diemer K; Muruganujan A; Guo N; Sato S; Bafna V; Istrail S; Lippert R; Schwartz R; Walenz B; Yooseph S; Allen D; Basu A; Baxendale J; Blick L; Caminha M; Carnes-Stine J; Caulk P; Chiang YH; Coyne M; Dahlke C; Deslattes Mays A; Dombroski M; Donnelly M; Ely D; Esparham S; Fosler C; Gire H; Glanowski S; Glasser K; Glodek A; Gorokhov M; Graham K; Gropman B; Harris M; Heil J; Henderson S; Hoover J; Jennings D; Jordan C; Jordan J; Kasha J; Kagan L; Kraft C; Levitsky A; Lewis M; Liu X; Lopez J; Ma D; Majoros W; McDaniel J; Murphy S; Newman M; Nguyen T; Nguyen N; Nodell M; Pan S; Peck J; Peterson M; Rowe W; Sanders R; Scott J; Simpson M; Smith T; Sprague A; Stockwell T; Turner R; Venter E; Wang M; Wen M; Wu D; Wu M; Xia A; Zandieh A; Zhu X
Science; 2001 Feb; 291(5507):1304-51. PubMed ID: 11181995
[TBL] [Abstract][Full Text] [Related]
3. Improved assembly and variant detection of a haploid human genome using single-molecule, high-fidelity long reads.
Vollger MR; Logsdon GA; Audano PA; Sulovari A; Porubsky D; Peluso P; Wenger AM; Concepcion GT; Kronenberg ZN; Munson KM; Baker C; Sanders AD; Spierings DCJ; Lansdorp PM; Surti U; Hunkapiller MW; Eichler EE
Ann Hum Genet; 2020 Mar; 84(2):125-140. PubMed ID: 31711268
[TBL] [Abstract][Full Text] [Related]
4. Polymorphic segmental duplications at 8p23.1 challenge the determination of individual defensin gene repertoires and the assembly of a contiguous human reference sequence.
Taudien S; Galgoczy P; Huse K; Reichwald K; Schilhabel M; Szafranski K; Shimizu A; Asakawa S; Frankish A; Loncarevic IF; Shimizu N; Siddiqui R; Platzer M
BMC Genomics; 2004 Dec; 5(1):92. PubMed ID: 15588320
[TBL] [Abstract][Full Text] [Related]
5. Finished sequence and assembly of the DUF1220-rich 1q21 region using a haploid human genome.
O'Bleness M; Searles VB; Dickens CM; Astling D; Albracht D; Mak AC; Lai YY; Lin C; Chu C; Graves T; Kwok PY; Wilson RK; Sikela JM
BMC Genomics; 2014 May; 15(1):387. PubMed ID: 24885025
[TBL] [Abstract][Full Text] [Related]
6. Bos taurus genome assembly.
Liu Y; Qin X; Song XZ; Jiang H; Shen Y; Durbin KJ; Lien S; Kent MP; Sodeland M; Ren Y; Zhang L; Sodergren E; Havlak P; Worley KC; Weinstock GM; Gibbs RA
BMC Genomics; 2009 Apr; 10():180. PubMed ID: 19393050
[TBL] [Abstract][Full Text] [Related]
7. Semi-automated assembly of high-quality diploid human reference genomes.
Jarvis ED; Formenti G; Rhie A; Guarracino A; Yang C; Wood J; Tracey A; Thibaud-Nissen F; Vollger MR; Porubsky D; Cheng H; Asri M; Logsdon GA; Carnevali P; Chaisson MJP; Chin CS; Cody S; Collins J; Ebert P; Escalona M; Fedrigo O; Fulton RS; Fulton LL; Garg S; Gerton JL; Ghurye J; Granat A; Green RE; Harvey W; Hasenfeld P; Hastie A; Haukness M; Jaeger EB; Jain M; Kirsche M; Kolmogorov M; Korbel JO; Koren S; Korlach J; Lee J; Li D; Lindsay T; Lucas J; Luo F; Marschall T; Mitchell MW; McDaniel J; Nie F; Olsen HE; Olson ND; Pesout T; Potapova T; Puiu D; Regier A; Ruan J; Salzberg SL; Sanders AD; Schatz MC; Schmitt A; Schneider VA; Selvaraj S; Shafin K; Shumate A; Stitziel NO; Stober C; Torrance J; Wagner J; Wang J; Wenger A; Xiao C; Zimin AV; Zhang G; Wang T; Li H; Garrison E; Haussler D; Hall I; Zook JM; Eichler EE; Phillippy AM; Paten B; Howe K; Miga KH;
Nature; 2022 Nov; 611(7936):519-531. PubMed ID: 36261518
[TBL] [Abstract][Full Text] [Related]
8. Shotgun sequence assembly and recent segmental duplications within the human genome.
She X; Jiang Z; Clark RA; Liu G; Cheng Z; Tuzun E; Church DM; Sutton G; Halpern AL; Eichler EE
Nature; 2004 Oct; 431(7011):927-30. PubMed ID: 15496912
[TBL] [Abstract][Full Text] [Related]
9. Sequencing of the human IG light chain loci from a hydatidiform mole BAC library reveals locus-specific signatures of genetic diversity.
Watson CT; Steinberg KM; Graves TA; Warren RL; Malig M; Schein J; Wilson RK; Holt RA; Eichler EE; Breden F
Genes Immun; 2015; 16(1):24-34. PubMed ID: 25338678
[TBL] [Abstract][Full Text] [Related]
10. A genome-wide BAC-end sequence survey provides first insights into sweetpotato (Ipomoea batatas (L.) Lam.) genome composition.
Si Z; Du B; Huo J; He S; Liu Q; Zhai H
BMC Genomics; 2016 Nov; 17(1):945. PubMed ID: 27871234
[TBL] [Abstract][Full Text] [Related]
11. Complete haplotype sequence of the human immunoglobulin heavy-chain variable, diversity, and joining genes and characterization of allelic and copy-number variation.
Watson CT; Steinberg KM; Huddleston J; Warren RL; Malig M; Schein J; Willsey AJ; Joy JB; Scott JK; Graves TA; Wilson RK; Holt RA; Eichler EE; Breden F
Am J Hum Genet; 2013 Apr; 92(4):530-46. PubMed ID: 23541343
[TBL] [Abstract][Full Text] [Related]
12. Alpha-CENTAURI: assessing novel centromeric repeat sequence variation with long read sequencing.
Sevim V; Bashir A; Chin CS; Miga KH
Bioinformatics; 2016 Jul; 32(13):1921-1924. PubMed ID: 27153570
[TBL] [Abstract][Full Text] [Related]
13. A high-throughput BAC end analysis protocol (BAC-anchor) for profiling genome assembly and physical mapping.
Yang X; Yang Y; Ling J; Guan J; Guo X; Dong D; Jin L; Huang S; Liu J; Li G
Plant Biotechnol J; 2020 Feb; 18(2):364-372. PubMed ID: 31254434
[TBL] [Abstract][Full Text] [Related]
14. A Fosmid Pool-Based Next Generation Sequencing Approach to Haplotype-Resolve Whole Genomes.
Suk EK; Schulz S; Mentrup B; Huebsch T; Duitama J; Hoehe MR
Methods Mol Biol; 2017; 1551():223-269. PubMed ID: 28138850
[TBL] [Abstract][Full Text] [Related]
15. De novo assembly and phasing of a Korean human genome.
Seo JS; Rhie A; Kim J; Lee S; Sohn MH; Kim CU; Hastie A; Cao H; Yun JY; Kim J; Kuk J; Park GH; Kim J; Ryu H; Kim J; Roh M; Baek J; Hunkapiller MW; Korlach J; Shin JY; Kim C
Nature; 2016 Oct; 538(7624):243-247. PubMed ID: 27706134
[TBL] [Abstract][Full Text] [Related]
16. HiCanu: accurate assembly of segmental duplications, satellites, and allelic variants from high-fidelity long reads.
Nurk S; Walenz BP; Rhie A; Vollger MR; Logsdon GA; Grothe R; Miga KH; Eichler EE; Phillippy AM; Koren S
Genome Res; 2020 Sep; 30(9):1291-1305. PubMed ID: 32801147
[TBL] [Abstract][Full Text] [Related]
17. LR_Gapcloser: a tiling path-based gap closer that uses long reads to complete genome assembly.
Xu GC; Xu TJ; Zhu R; Zhang Y; Li SQ; Wang HW; Li JT
Gigascience; 2019 Jan; 8(1):. PubMed ID: 30576505
[TBL] [Abstract][Full Text] [Related]
18. Assessing pooled BAC and whole genome shotgun strategies for assembly of complex genomes.
Haiminen N; Feltus FA; Parida L
BMC Genomics; 2011 Apr; 12():194. PubMed ID: 21496274
[TBL] [Abstract][Full Text] [Related]
19. Assessing the feasibility of GS FLX Pyrosequencing for sequencing the Atlantic salmon genome.
Quinn NL; Levenkova N; Chow W; Bouffard P; Boroevich KA; Knight JR; Jarvie TP; Lubieniecki KP; Desany BA; Koop BF; Harkins TT; Davidson WS
BMC Genomics; 2008 Aug; 9():404. PubMed ID: 18755037
[TBL] [Abstract][Full Text] [Related]
20. An improved genome reference for the African cichlid, Metriaclima zebra.
Conte MA; Kocher TD
BMC Genomics; 2015 Sep; 16(1):724. PubMed ID: 26394688
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
