These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
119 related articles for article (PubMed ID: 25381552)
1. Impact of T-RFLP data analysis choices on assessments of microbial community structure and dynamics. Fredriksson NJ; Hermansson M; Wilén BM BMC Bioinformatics; 2014 Nov; 15(1):360. PubMed ID: 25381552 [TBL] [Abstract][Full Text] [Related]
2. Separation of fluorescence-labelled terminal restriction fragment DNA on a two-dimensional gel (T-RFs-2D) - an efficient approach for microbial consortium characterization. Wang S; He J Environ Microbiol; 2011 Sep; 13(9):2565-75. PubMed ID: 21824243 [TBL] [Abstract][Full Text] [Related]
3. Formation of pseudo-terminal restriction fragments, a PCR-related bias affecting terminal restriction fragment length polymorphism analysis of microbial community structure. Egert M; Friedrich MW Appl Environ Microbiol; 2003 May; 69(5):2555-62. PubMed ID: 12732521 [TBL] [Abstract][Full Text] [Related]
4. Tools for T-RFLP data analysis using Excel. Fredriksson NJ; Hermansson M; Wilén BM BMC Bioinformatics; 2014 Nov; 15(1):361. PubMed ID: 25388093 [TBL] [Abstract][Full Text] [Related]
5. Modified T-RFLP methods for taxonomic interpretation of T-RF. Lee HK; Kim HR; Mengoni A; Lee DH J Microbiol Biotechnol; 2008 Apr; 18(4):624-30. PubMed ID: 18467853 [TBL] [Abstract][Full Text] [Related]
6. Seed-colonizing bacterial communities associated with the suppression of Pythium seedling disease in a municipal biosolids compost. Chen MH; Jack AL; McGuire IC; Nelson EB Phytopathology; 2012 May; 102(5):478-89. PubMed ID: 22352305 [TBL] [Abstract][Full Text] [Related]
7. Advances in the use of terminal restriction fragment length polymorphism (T-RFLP) analysis of 16S rRNA genes to characterize microbial communities. Schütte UM; Abdo Z; Bent SJ; Shyu C; Williams CJ; Pierson JD; Forney LJ Appl Microbiol Biotechnol; 2008 Sep; 80(3):365-80. PubMed ID: 18648804 [TBL] [Abstract][Full Text] [Related]
8. Characterization of mucosa-associated bacterial communities of the mouse intestine by terminal restriction fragment length polymorphism: Utility of sampling strategies and methods to reduce single-stranded DNA artifacts. Costa E; Puhl NJ; Selinger LB; Inglis GD J Microbiol Methods; 2009 Aug; 78(2):175-80. PubMed ID: 19463863 [TBL] [Abstract][Full Text] [Related]
9. T-RFPred: a nucleotide sequence size prediction tool for microbial community description based on terminal-restriction fragment length polymorphism chromatograms. Fernàndez-Guerra A; Buchan A; Mou X; Casamayor EO; González JM BMC Microbiol; 2010 Oct; 10():262. PubMed ID: 20950425 [TBL] [Abstract][Full Text] [Related]
10. Assessing terminal restriction fragment length polymorphism suitability for the description of bacterial community structure and dynamics in hydrocarbon-polluted marine environments. Denaro R; D'Auria G; Di Marco G; Genovese M; Troussellier M; Yakimov MM; Giuliano L Environ Microbiol; 2005 Jan; 7(1):78-87. PubMed ID: 15643938 [TBL] [Abstract][Full Text] [Related]
11. Analysis of T-RFLP data using analysis of variance and ordination methods: a comparative study. Culman SW; Gauch HG; Blackwood CB; Thies JE J Microbiol Methods; 2008 Sep; 75(1):55-63. PubMed ID: 18584903 [TBL] [Abstract][Full Text] [Related]
12. Assessment of biases associated with profiling simple, model communities using terminal-restriction fragment length polymorphism-based analyses. Frey JC; Angert ER; Pell AN J Microbiol Methods; 2006 Oct; 67(1):9-19. PubMed ID: 16563536 [TBL] [Abstract][Full Text] [Related]
13. Reliability for detecting composition and changes of microbial communities by T-RFLP genetic profiling. Hartmann M; Widmer F FEMS Microbiol Ecol; 2008 Feb; 63(2):249-60. PubMed ID: 18177353 [TBL] [Abstract][Full Text] [Related]
14. A novel strategy to extract specific phylogenetic sequence information from community T-RFLP. Widmer F; Hartmann M; Frey B; Kölliker R J Microbiol Methods; 2006 Sep; 66(3):512-20. PubMed ID: 16564584 [TBL] [Abstract][Full Text] [Related]
15. Multivariate statistical analyses of rDNA and rRNA fingerprint data to differentiate microbial communities in swine manure. Talbot G; Roy CS; Topp E; Beaulieu C; Palin MF; Massé DI FEMS Microbiol Ecol; 2009 Dec; 70(3):540-52. PubMed ID: 19694811 [TBL] [Abstract][Full Text] [Related]
16. An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Osborn AM; Moore ER; Timmis KN Environ Microbiol; 2000 Feb; 2(1):39-50. PubMed ID: 11243261 [TBL] [Abstract][Full Text] [Related]
17. Variations in T-RFLP profiles with differing chemistries of fluorescent dyes used for labeling the PCR primers. Pandey J; Ganesan K; Jain RK J Microbiol Methods; 2007 Mar; 68(3):633-8. PubMed ID: 17196691 [TBL] [Abstract][Full Text] [Related]
18. PyroTRF-ID: a novel bioinformatics methodology for the affiliation of terminal-restriction fragments using 16S rRNA gene pyrosequencing data. Weissbrodt DG; Shani N; Sinclair L; Lefebvre G; Rossi P; Maillard J; Rougemont J; Holliger C BMC Microbiol; 2012 Dec; 12():306. PubMed ID: 23270314 [TBL] [Abstract][Full Text] [Related]