These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

176 related articles for article (PubMed ID: 25426337)

  • 1. Unexpected cross-species contamination in genome sequencing projects.
    Merchant S; Wood DE; Salzberg SL
    PeerJ; 2014; 2():e675. PubMed ID: 25426337
    [TBL] [Abstract][Full Text] [Related]  

  • 2. MarkerScan: Separation and assembly of cobionts sequenced alongside target species in biodiversity genomics projects.
    Vancaester E; Blaxter ML
    Wellcome Open Res; 2024; 9():33. PubMed ID: 38617467
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Human contamination in bacterial genomes has created thousands of spurious proteins.
    Breitwieser FP; Pertea M; Zimin AV; Salzberg SL
    Genome Res; 2019 Jun; 29(6):954-960. PubMed ID: 31064768
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Optimizing and evaluating the reconstruction of Metagenome-assembled microbial genomes.
    Papudeshi B; Haggerty JM; Doane M; Morris MM; Walsh K; Beattie DT; Pande D; Zaeri P; Silva GGZ; Thompson F; Edwards RA; Dinsdale EA
    BMC Genomics; 2017 Nov; 18(1):915. PubMed ID: 29183281
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Harnessing cross-species alignment to discover SNPs and generate a draft genome sequence of a bighorn sheep (Ovis canadensis).
    Miller JM; Moore SS; Stothard P; Liao X; Coltman DW
    BMC Genomics; 2015 May; 16(1):397. PubMed ID: 25990117
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Multi-CAR: a tool of contig scaffolding using multiple references.
    Chen KT; Chen CJ; Shen HT; Liu CL; Huang SH; Lu CL
    BMC Bioinformatics; 2016 Dec; 17(Suppl 17):469. PubMed ID: 28155633
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A clone-free, single molecule map of the domestic cow (Bos taurus) genome.
    Zhou S; Goldstein S; Place M; Bechner M; Patino D; Potamousis K; Ravindran P; Pape L; Rincon G; Hernandez-Ortiz J; Medrano JF; Schwartz DC
    BMC Genomics; 2015 Aug; 16(1):644. PubMed ID: 26314885
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Lessons for livestock genomics from genome and transcriptome sequencing in cattle and other mammals.
    Taylor JF; Whitacre LK; Hoff JL; Tizioto PC; Kim J; Decker JE; Schnabel RD
    Genet Sel Evol; 2016 Aug; 48(1):59. PubMed ID: 27534529
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Blobology: exploring raw genome data for contaminants, symbionts and parasites using taxon-annotated GC-coverage plots.
    Kumar S; Jones M; Koutsovoulos G; Clarke M; Blaxter M
    Front Genet; 2013; 4():237. PubMed ID: 24348509
    [TBL] [Abstract][Full Text] [Related]  

  • 10. [Analysis, identification and correction of some errors of model refseqs appeared in NCBI Human Gene Database by in silico cloning and experimental verification of novel human genes].
    Zhang DL; Ji L; Li YD
    Yi Chuan Xue Bao; 2004 May; 31(5):431-43. PubMed ID: 15478601
    [TBL] [Abstract][Full Text] [Related]  

  • 11. GFinisher: a new strategy to refine and finish bacterial genome assemblies.
    Guizelini D; Raittz RT; Cruz LM; Souza EM; Steffens MB; Pedrosa FO
    Sci Rep; 2016 Oct; 6():34963. PubMed ID: 27721396
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Gen2Epi: an automated whole-genome sequencing pipeline for linking full genomes to antimicrobial susceptibility and molecular epidemiological data in Neisseria gonorrhoeae.
    Singh R; Dillon JR; Demczuk W; Kusalik A
    BMC Genomics; 2019 Mar; 20(1):165. PubMed ID: 30832565
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Fragmentation and Coverage Variation in Viral Metagenome Assemblies, and Their Effect in Diversity Calculations.
    García-López R; Vázquez-Castellanos JF; Moya A
    Front Bioeng Biotechnol; 2015; 3():141. PubMed ID: 26442255
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Serendipitous discovery of Wolbachia genomes in multiple Drosophila species.
    Salzberg SL; Dunning Hotopp JC; Delcher AL; Pop M; Smith DR; Eisen MB; Nelson WC
    Genome Biol; 2005; 6(3):R23. PubMed ID: 15774024
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Large-scale contamination of microbial isolate genomes by Illumina PhiX control.
    Mukherjee S; Huntemann M; Ivanova N; Kyrpides NC; Pati A
    Stand Genomic Sci; 2015; 10():18. PubMed ID: 26203331
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Using comparative genomics to reorder the human genome sequence into a virtual sheep genome.
    Dalrymple BP; Kirkness EF; Nefedov M; McWilliam S; Ratnakumar A; Barris W; Zhao S; Shetty J; Maddox JF; O'Grady M; Nicholas F; Crawford AM; Smith T; de Jong PJ; McEwan J; Oddy VH; Cockett NE;
    Genome Biol; 2007; 8(7):R152. PubMed ID: 17663790
    [TBL] [Abstract][Full Text] [Related]  

  • 17.
    Todd SM; Settlage RE; Lahmers KK; Slade DJ
    mSphere; 2018 Jul; 3(4):. PubMed ID: 29976645
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Identifying contamination with advanced visualization and analysis practices: metagenomic approaches for eukaryotic genome assemblies.
    Delmont TO; Eren AM
    PeerJ; 2016; 4():e1839. PubMed ID: 27069789
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Coverage-Versus-Length Plots, a Simple Quality Control Step for
    Douglass AP; O'Brien CE; Offei B; Coughlan AY; Ortiz-Merino RA; Butler G; Byrne KP; Wolfe KH
    G3 (Bethesda); 2019 Mar; 9(3):879-887. PubMed ID: 30674538
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Human Contamination in Public Genome Assemblies.
    Kryukov K; Imanishi T
    PLoS One; 2016; 11(9):e0162424. PubMed ID: 27611326
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.