These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

356 related articles for article (PubMed ID: 25461581)

  • 1. One chromosome, one contig: complete microbial genomes from long-read sequencing and assembly.
    Koren S; Phillippy AM
    Curr Opin Microbiol; 2015 Feb; 23():110-20. PubMed ID: 25461581
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Reducing assembly complexity of microbial genomes with single-molecule sequencing.
    Koren S; Harhay GP; Smith TP; Bono JL; Harhay DM; Mcvey SD; Radune D; Bergman NH; Phillippy AM
    Genome Biol; 2013; 14(9):R101. PubMed ID: 24034426
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Short read fragment assembly of bacterial genomes.
    Chaisson MJ; Pevzner PA
    Genome Res; 2008 Feb; 18(2):324-30. PubMed ID: 18083777
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Improved assembly of noisy long reads by k-mer validation.
    Carvalho AB; Dupim EG; Goldstein G
    Genome Res; 2016 Dec; 26(12):1710-1720. PubMed ID: 27831497
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Fragment assembly with short reads.
    Chaisson M; Pevzner P; Tang H
    Bioinformatics; 2004 Sep; 20(13):2067-74. PubMed ID: 15059830
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A hybrid approach for the automated finishing of bacterial genomes.
    Bashir A; Klammer A; Robins WP; Chin CS; Webster D; Paxinos E; Hsu D; Ashby M; Wang S; Peluso P; Sebra R; Sorenson J; Bullard J; Yen J; Valdovino M; Mollova E; Luong K; Lin S; LaMay B; Joshi A; Rowe L; Frace M; Tarr CL; Turnsek M; Davis BM; Kasarskis A; Mekalanos JJ; Waldor MK; Schadt EE
    Nat Biotechnol; 2012 Jul; 30(7):701-707. PubMed ID: 22750883
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Single-Molecule Real-Time Sequencing Combined with Optical Mapping Yields Completely Finished Fungal Genome.
    Faino L; Seidl MF; Datema E; van den Berg GC; Janssen A; Wittenberg AH; Thomma BP
    mBio; 2015 Aug; 6(4):. PubMed ID: 26286689
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Single-molecule sequencing of the desiccation-tolerant grass Oropetium thomaeum.
    VanBuren R; Bryant D; Edger PP; Tang H; Burgess D; Challabathula D; Spittle K; Hall R; Gu J; Lyons E; Freeling M; Bartels D; Ten Hallers B; Hastie A; Michael TP; Mockler TC
    Nature; 2015 Nov; 527(7579):508-11. PubMed ID: 26560029
    [TBL] [Abstract][Full Text] [Related]  

  • 9. The long march: a sample preparation technique that enhances contig length and coverage by high-throughput short-read sequencing.
    Sorber K; Chiu C; Webster D; Dimon M; Ruby JG; Hekele A; DeRisi JL
    PLoS One; 2008; 3(10):e3495. PubMed ID: 18941527
    [TBL] [Abstract][Full Text] [Related]  

  • 10. OPERA-LG: efficient and exact scaffolding of large, repeat-rich eukaryotic genomes with performance guarantees.
    Gao S; Bertrand D; Chia BK; Nagarajan N
    Genome Biol; 2016 May; 17():102. PubMed ID: 27169502
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Canu: scalable and accurate long-read assembly via adaptive
    Koren S; Walenz BP; Berlin K; Miller JR; Bergman NH; Phillippy AM
    Genome Res; 2017 May; 27(5):722-736. PubMed ID: 28298431
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Whole-genome sequencing and assembly with high-throughput, short-read technologies.
    Sundquist A; Ronaghi M; Tang H; Pevzner P; Batzoglou S
    PLoS One; 2007 May; 2(5):e484. PubMed ID: 17534434
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Circlator: automated circularization of genome assemblies using long sequencing reads.
    Hunt M; Silva ND; Otto TD; Parkhill J; Keane JA; Harris SR
    Genome Biol; 2015 Dec; 16():294. PubMed ID: 26714481
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Assembly reconciliation.
    Zimin AV; Smith DR; Sutton G; Yorke JA
    Bioinformatics; 2008 Jan; 24(1):42-5. PubMed ID: 18057021
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A Sanger/pyrosequencing hybrid approach for the generation of high-quality draft assemblies of marine microbial genomes.
    Goldberg SM; Johnson J; Busam D; Feldblyum T; Ferriera S; Friedman R; Halpern A; Khouri H; Kravitz SA; Lauro FM; Li K; Rogers YH; Strausberg R; Sutton G; Tallon L; Thomas T; Venter E; Frazier M; Venter JC
    Proc Natl Acad Sci U S A; 2006 Jul; 103(30):11240-5. PubMed ID: 16840556
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Assembly and validation of the genome of the nonmodel basal angiosperm Amborella.
    Chamala S; Chanderbali AS; Der JP; Lan T; Walts B; Albert VA; dePamphilis CW; Leebens-Mack J; Rounsley S; Schuster SC; Wing RA; Xiao N; Moore R; Soltis PS; Soltis DE; Barbazuk WB
    Science; 2013 Dec; 342(6165):1516-7. PubMed ID: 24357320
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Sequence data for Clostridium autoethanogenum using three generations of sequencing technologies.
    Utturkar SM; Klingeman DM; Bruno-Barcena JM; Chinn MS; Grunden AM; Köpke M; Brown SD
    Sci Data; 2015; 2():150014. PubMed ID: 25977818
    [TBL] [Abstract][Full Text] [Related]  

  • 18. HySA: a Hybrid Structural variant Assembly approach using next-generation and single-molecule sequencing technologies.
    Fan X; Chaisson M; Nakhleh L; Chen K
    Genome Res; 2017 May; 27(5):793-800. PubMed ID: 28104618
    [TBL] [Abstract][Full Text] [Related]  

  • 19. POSA: perl objects for DNA sequencing data analysis.
    Aerts JA; Jungerius BJ; Groenen MA
    BMC Genomics; 2004 Aug; 5(1):60. PubMed ID: 15333141
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Mapping contigs using CONTIGuator.
    Galardini M; Mengoni A; Bazzicalupo M
    Methods Mol Biol; 2015; 1231():163-76. PubMed ID: 25343865
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 18.