303 related articles for article (PubMed ID: 25494611)
1. An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies.
Blanc-Mathieu R; Verhelst B; Derelle E; Rombauts S; Bouget FY; Carré I; Château A; Eyre-Walker A; Grimsley N; Moreau H; Piégu B; Rivals E; Schackwitz W; Van de Peer Y; Piganeau G
BMC Genomics; 2014 Dec; 15(1):1103. PubMed ID: 25494611
[TBL] [Abstract][Full Text] [Related]
2. The genome of flax (Linum usitatissimum) assembled de novo from short shotgun sequence reads.
Wang Z; Hobson N; Galindo L; Zhu S; Shi D; McDill J; Yang L; Hawkins S; Neutelings G; Datla R; Lambert G; Galbraith DW; Grassa CJ; Geraldes A; Cronk QC; Cullis C; Dash PK; Kumar PA; Cloutier S; Sharpe AG; Wong GK; Wang J; Deyholos MK
Plant J; 2012 Nov; 72(3):461-73. PubMed ID: 22757964
[TBL] [Abstract][Full Text] [Related]
3. Screening the Sargasso Sea metagenome for data to investigate genome evolution in Ostreococcus (Prasinophyceae, Chlorophyta).
Piganeau G; Moreau H
Gene; 2007 Dec; 406(1-2):184-90. PubMed ID: 17961934
[TBL] [Abstract][Full Text] [Related]
4. Ostreococcus tauri is a new model green alga for studying iron metabolism in eukaryotic phytoplankton.
Lelandais G; Scheiber I; Paz-Yepes J; Lozano JC; Botebol H; Pilátová J; Žárský V; Léger T; Blaiseau PL; Bowler C; Bouget FY; Camadro JM; Sutak R; Lesuisse E
BMC Genomics; 2016 May; 17():319. PubMed ID: 27142620
[TBL] [Abstract][Full Text] [Related]
5. Cryptic sex in the smallest eukaryotic marine green alga.
Grimsley N; Péquin B; Bachy C; Moreau H; Piganeau G
Mol Biol Evol; 2010 Jan; 27(1):47-54. PubMed ID: 19734297
[TBL] [Abstract][Full Text] [Related]
6. Subset selection of high-depth next generation sequencing reads for de novo genome assembly using MapReduce framework.
Fang CH; Chang YJ; Chung WC; Hsieh PH; Lin CY; Ho JM
BMC Genomics; 2015; 16 Suppl 12(Suppl 12):S9. PubMed ID: 26678408
[TBL] [Abstract][Full Text] [Related]
7. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features.
Derelle E; Ferraz C; Rombauts S; Rouzé P; Worden AZ; Robbens S; Partensky F; Degroeve S; Echeynié S; Cooke R; Saeys Y; Wuyts J; Jabbari K; Bowler C; Panaud O; Piégu B; Ball SG; Ral JP; Bouget FY; Piganeau G; De Baets B; Picard A; Delseny M; Demaille J; Van de Peer Y; Moreau H
Proc Natl Acad Sci U S A; 2006 Aug; 103(31):11647-52. PubMed ID: 16868079
[TBL] [Abstract][Full Text] [Related]
8. Combining Nanopore and Illumina Sequencing Permits Detailed Analysis of Insertion Mutations and Structural Variations Produced by PEG-Mediated Transformation in
Thomy J; Sanchez F; Gut M; Cruz F; Alioto T; Piganeau G; Grimsley N; Yau S
Cells; 2021 Mar; 10(3):. PubMed ID: 33802698
[No Abstract] [Full Text] [Related]
9. HGA: de novo genome assembly method for bacterial genomes using high coverage short sequencing reads.
Al-Okaily AA
BMC Genomics; 2016 Mar; 17():193. PubMed ID: 26945881
[TBL] [Abstract][Full Text] [Related]
10. Mitogenome assembly from genomic multiplex libraries: comparison of strategies and novel mitogenomes for five species of frogs.
Machado DJ; Lyra ML; Grant T
Mol Ecol Resour; 2016 May; 16(3):686-93. PubMed ID: 26607054
[TBL] [Abstract][Full Text] [Related]
11. The power of single molecule real-time sequencing technology in the de novo assembly of a eukaryotic genome.
Sakai H; Naito K; Ogiso-Tanaka E; Takahashi Y; Iseki K; Muto C; Satou K; Teruya K; Shiroma A; Shimoji M; Hirano T; Itoh T; Kaga A; Tomooka N
Sci Rep; 2015 Nov; 5():16780. PubMed ID: 26616024
[TBL] [Abstract][Full Text] [Related]
12. Genome-wide metabolic network reconstruction of the picoalga Ostreococcus.
Krumholz EW; Yang H; Weisenhorn P; Henry CS; Libourel IG
J Exp Bot; 2012 Mar; 63(6):2353-62. PubMed ID: 22207618
[TBL] [Abstract][Full Text] [Related]
13. Efficient gene targeting and removal of foreign DNA by homologous recombination in the picoeukaryote Ostreococcus.
Lozano JC; Schatt P; Botebol H; Vergé V; Lesuisse E; Blain S; Carré IA; Bouget FY
Plant J; 2014 Jun; 78(6):1073-83. PubMed ID: 24698018
[TBL] [Abstract][Full Text] [Related]
14. Tigmint: correcting assembly errors using linked reads from large molecules.
Jackman SD; Coombe L; Chu J; Warren RL; Vandervalk BP; Yeo S; Xue Z; Mohamadi H; Bohlmann J; Jones SJM; Birol I
BMC Bioinformatics; 2018 Oct; 19(1):393. PubMed ID: 30367597
[TBL] [Abstract][Full Text] [Related]
15. The complex task of choosing a de novo assembly: lessons from fungal genomes.
Gallo JE; Muñoz JF; Misas E; McEwen JG; Clay OK
Comput Biol Chem; 2014 Dec; 53 Pt A():97-107. PubMed ID: 25262360
[TBL] [Abstract][Full Text] [Related]
16. The complete mitochondrial genome sequence of the green microalga Lobosphaera (Parietochloris) incisa reveals a new type of palindromic repetitive repeat.
Tourasse NJ; Shtaida N; Khozin-Goldberg I; Boussiba S; Vallon O
BMC Genomics; 2015 Aug; 16(1):580. PubMed ID: 26238519
[TBL] [Abstract][Full Text] [Related]
17. Ostreococcus tauri: seeing through the genes to the genome.
Keeling PJ
Trends Genet; 2007 Apr; 23(4):151-4. PubMed ID: 17331615
[TBL] [Abstract][Full Text] [Related]
18. Improvement of the banana "Musa acuminata" reference sequence using NGS data and semi-automated bioinformatics methods.
Martin G; Baurens FC; Droc G; Rouard M; Cenci A; Kilian A; Hastie A; Doležel J; Aury JM; Alberti A; Carreel F; D'Hont A
BMC Genomics; 2016 Mar; 17():243. PubMed ID: 26984673
[TBL] [Abstract][Full Text] [Related]
19. The complete chloroplast and mitochondrial DNA sequence of Ostreococcus tauri: organelle genomes of the smallest eukaryote are examples of compaction.
Robbens S; Derelle E; Ferraz C; Wuyts J; Moreau H; Van de Peer Y
Mol Biol Evol; 2007 Apr; 24(4):956-68. PubMed ID: 17251180
[TBL] [Abstract][Full Text] [Related]
20. Genomic transformation of the picoeukaryote Ostreococcus tauri.
van Ooijen G; Knox K; Kis K; Bouget FY; Millar AJ
J Vis Exp; 2012 Jul; (65):e4074. PubMed ID: 22825291
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
