149 related articles for article (PubMed ID: 25495633)
1. Exact reconstruction of gene regulatory networks using compressive sensing.
Chang YH; Gray JW; Tomlin CJ
BMC Bioinformatics; 2014 Dec; 15(1):400. PubMed ID: 25495633
[TBL] [Abstract][Full Text] [Related]
2. A Sparse Reconstruction Approach for Identifying Gene Regulatory Networks Using Steady-State Experiment Data.
Zhang W; Zhou T
PLoS One; 2015; 10(7):e0130979. PubMed ID: 26207991
[TBL] [Abstract][Full Text] [Related]
3. Reconstructing gene-regulatory networks from time series, knock-out data, and prior knowledge.
Geier F; Timmer J; Fleck C
BMC Syst Biol; 2007 Feb; 1():11. PubMed ID: 17408501
[TBL] [Abstract][Full Text] [Related]
4. BGRMI: A method for inferring gene regulatory networks from time-course gene expression data and its application in breast cancer research.
Iglesias-Martinez LF; Kolch W; Santra T
Sci Rep; 2016 Nov; 6():37140. PubMed ID: 27876826
[TBL] [Abstract][Full Text] [Related]
5. Optimization-based inference for temporally evolving networks with applications in biology.
Chang YH; Gray J; Tomlin C
J Comput Biol; 2012 Dec; 19(12):1307-23. PubMed ID: 23210478
[TBL] [Abstract][Full Text] [Related]
6. Reconstructing directed signed gene regulatory network from microarray data.
Qiu P; Plevritis SK
IEEE Trans Biomed Eng; 2011 Dec; 58(12):3518-21. PubMed ID: 21803675
[TBL] [Abstract][Full Text] [Related]
7. Learning genetic regulatory network connectivity from time series data.
Barker NA; Myers CJ; Kuwahara H
IEEE/ACM Trans Comput Biol Bioinform; 2011; 8(1):152-65. PubMed ID: 21071804
[TBL] [Abstract][Full Text] [Related]
8. Multiscale binarization of gene expression data for reconstructing Boolean networks.
Hopfensitz M; Mussel C; Wawra C; Maucher M; Kuhl M; Neumann H; Kestler HA
IEEE/ACM Trans Comput Biol Bioinform; 2012; 9(2):487-98. PubMed ID: 21464514
[TBL] [Abstract][Full Text] [Related]
9. 3off2: A network reconstruction algorithm based on 2-point and 3-point information statistics.
Affeldt S; Verny L; Isambert H
BMC Bioinformatics; 2016 Jan; 17 Suppl 2(Suppl 2):12. PubMed ID: 26823190
[TBL] [Abstract][Full Text] [Related]
10. Inference of genetic networks using random forests: Assigning different weights for gene expression data.
Kimura S; Tokuhisa M; Okada M
J Bioinform Comput Biol; 2019 Aug; 17(4):1950015. PubMed ID: 31291807
[TBL] [Abstract][Full Text] [Related]
11. Learning gene regulatory networks from gene expression measurements using non-parametric molecular kinetics.
Aijö T; Lähdesmäki H
Bioinformatics; 2009 Nov; 25(22):2937-44. PubMed ID: 19706742
[TBL] [Abstract][Full Text] [Related]
12. A Computational Approach to Study Gene Expression Networks.
Rubinstein A; Kassir Y
Methods Mol Biol; 2017; 1471():325-334. PubMed ID: 28349406
[TBL] [Abstract][Full Text] [Related]
13. Fitting a geometric graph to a protein-protein interaction network.
Higham DJ; Rasajski M; Przulj N
Bioinformatics; 2008 Apr; 24(8):1093-9. PubMed ID: 18344248
[TBL] [Abstract][Full Text] [Related]
14. Reconstructing biological networks using conditional correlation analysis.
Rice JJ; Tu Y; Stolovitzky G
Bioinformatics; 2005 Mar; 21(6):765-73. PubMed ID: 15486043
[TBL] [Abstract][Full Text] [Related]
15. A swarm intelligence framework for reconstructing gene networks: searching for biologically plausible architectures.
Kentzoglanakis K; Poole M
IEEE/ACM Trans Comput Biol Bioinform; 2012; 9(2):358-71. PubMed ID: 21576756
[TBL] [Abstract][Full Text] [Related]
16. Stability in GRN Inference.
Jurman G; Filosi M; Visintainer R; Riccadonna S; Furlanello C
Methods Mol Biol; 2019; 1883():323-346. PubMed ID: 30547407
[TBL] [Abstract][Full Text] [Related]
17. Employing decomposable partially observable Markov decision processes to control gene regulatory networks.
Erdogdu U; Polat F; Alhajj R
Artif Intell Med; 2017 Nov; 83():14-34. PubMed ID: 28733120
[TBL] [Abstract][Full Text] [Related]
18. Unraveling gene regulatory networks from time-resolved gene expression data - a measures comparison study.
Hempel S; Koseska A; Nikoloski Z; Kurths J
BMC Bioinformatics; 2011 Jul; 12():292. PubMed ID: 21771321
[TBL] [Abstract][Full Text] [Related]
19. Multi-Objective Optimization Algorithm to Discover Condition-Specific Modules in Multiple Networks.
Ma X; Sun P; Zhao J
Molecules; 2017 Dec; 22(12):. PubMed ID: 29240706
[TBL] [Abstract][Full Text] [Related]
20. Structure Optimization for Large Gene Networks Based on Greedy Strategy.
Gómez-Vela F; Rodriguez-Baena DS; Vázquez-Noguera JL
Comput Math Methods Med; 2018; 2018():9674108. PubMed ID: 30013615
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]