BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

3239 related articles for article (PubMed ID: 25521941)

  • 1. cytoHubba: identifying hub objects and sub-networks from complex interactome.
    Chin CH; Chen SH; Wu HH; Ho CW; Ko MT; Lin CY
    BMC Syst Biol; 2014; 8 Suppl 4(Suppl 4):S11. PubMed ID: 25521941
    [TBL] [Abstract][Full Text] [Related]  

  • 2. CytoNCA: a cytoscape plugin for centrality analysis and evaluation of protein interaction networks.
    Tang Y; Li M; Wang J; Pan Y; Wu FX
    Biosystems; 2015 Jan; 127():67-72. PubMed ID: 25451770
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Prediction of essential proteins based on overlapping essential modules.
    Zhao B; Wang J; Li M; Wu FX; Pan Y
    IEEE Trans Nanobioscience; 2014 Dec; 13(4):415-24. PubMed ID: 25122840
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Effective identification of essential proteins based on priori knowledge, network topology and gene expressions.
    Li M; Zheng R; Zhang H; Wang J; Pan Y
    Methods; 2014 Jun; 67(3):325-33. PubMed ID: 24565748
    [TBL] [Abstract][Full Text] [Related]  

  • 5. k-Partite cliques of protein interactions: A novel subgraph topology for functional coherence analysis on PPI networks.
    Liu Q; Chen YP; Li J
    J Theor Biol; 2014 Jan; 340():146-54. PubMed ID: 24056214
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Information flow analysis of interactome networks.
    Missiuro PV; Liu K; Zou L; Ross BC; Zhao G; Liu JS; Ge H
    PLoS Comput Biol; 2009 Apr; 5(4):e1000350. PubMed ID: 19503817
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A local average connectivity-based method for identifying essential proteins from the network level.
    Li M; Wang J; Chen X; Wang H; Pan Y
    Comput Biol Chem; 2011 Jun; 35(3):143-50. PubMed ID: 21704260
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Functional centrality: detecting lethality of proteins in protein interaction networks.
    Tew KL; Li XL; Tan SH
    Genome Inform; 2007; 19():166-77. PubMed ID: 18546514
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Spectral affinity in protein networks.
    Voevodski K; Teng SH; Xia Y
    BMC Syst Biol; 2009 Nov; 3():112. PubMed ID: 19943959
    [TBL] [Abstract][Full Text] [Related]  

  • 10. FunMod: a Cytoscape plugin for identifying functional modules in undirected protein-protein networks.
    Natale M; Benso A; Di Carlo S; Ficarra E
    Genomics Proteomics Bioinformatics; 2014 Aug; 12(4):178-86. PubMed ID: 25153667
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Identification of hub subnetwork based on topological features of genes in breast cancer.
    Zhuang DY; Jiang L; He QQ; Zhou P; Yue T
    Int J Mol Med; 2015 Mar; 35(3):664-74. PubMed ID: 25573623
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Combining functional and topological properties to identify core modules in protein interaction networks.
    Lubovac Z; Gamalielsson J; Olsson B
    Proteins; 2006 Sep; 64(4):948-59. PubMed ID: 16794996
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Visualization and analysis of biological networks.
    Millán PP
    Methods Mol Biol; 2013; 1021():63-88. PubMed ID: 23715980
    [TBL] [Abstract][Full Text] [Related]  

  • 14. TimeXNet: identifying active gene sub-networks using time-course gene expression profiles.
    Patil A; Nakai K
    BMC Syst Biol; 2014; 8 Suppl 4(Suppl 4):S2. PubMed ID: 25522063
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Hubba: hub objects analyzer--a framework of interactome hubs identification for network biology.
    Lin CY; Chin CH; Wu HH; Chen SH; Ho CW; Ko MT
    Nucleic Acids Res; 2008 Jul; 36(Web Server issue):W438-43. PubMed ID: 18503085
    [TBL] [Abstract][Full Text] [Related]  

  • 16. PerturbationAnalyzer: a tool for investigating the effects of concentration perturbation on protein interaction networks.
    Li F; Li P; Xu W; Peng Y; Bo X; Wang S
    Bioinformatics; 2010 Jan; 26(2):275-7. PubMed ID: 19914922
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Structure discovery in PPI networks using pattern-based network decomposition.
    Bachman P; Liu Y
    Bioinformatics; 2009 Jul; 25(14):1814-21. PubMed ID: 19447784
    [TBL] [Abstract][Full Text] [Related]  

  • 18. POINeT: protein interactome with sub-network analysis and hub prioritization.
    Lee SA; Chan CH; Chen TC; Yang CY; Huang KC; Tsai CH; Lai JM; Wang FS; Kao CY; Huang CY
    BMC Bioinformatics; 2009 Apr; 10():114. PubMed ID: 19379523
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Maximum likelihood inference of the evolutionary history of a PPI network from the duplication history of its proteins.
    Li S; Choi KP; Wu T; Zhang L
    IEEE/ACM Trans Comput Biol Bioinform; 2013; 10(6):1412-21. PubMed ID: 24407300
    [TBL] [Abstract][Full Text] [Related]  

  • 20. CABIN: collective analysis of biological interaction networks.
    Singhal M; Domico K
    Comput Biol Chem; 2007 Jun; 31(3):222-5. PubMed ID: 17500038
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 162.