These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

129 related articles for article (PubMed ID: 25577027)

  • 1. Nonlinear analysis of tRNAs nucleotide sequences by random walks: randomness and order in the primitive informational polymers.
    Bianciardi G; Borruso L
    J Mol Evol; 2015 Feb; 80(2):81-5. PubMed ID: 25577027
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Analysis of tRNA composition and folding in psychrophilic, mesophilic and thermophilic genomes: indications for thermal adaptation.
    Dutta A; Chaudhuri K
    FEMS Microbiol Lett; 2010 Apr; 305(2):100-8. PubMed ID: 20659165
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Sequence evidence in the archaeal genomes that tRNAs emerged through the combination of ancestral genes as 5' and 3' tRNA halves.
    Fujishima K; Sugahara J; Tomita M; Kanai A
    PLoS One; 2008 Feb; 3(2):e1622. PubMed ID: 18286179
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Comprehensive analysis of archaeal tRNA genes reveals rapid increase of tRNA introns in the order thermoproteales.
    Sugahara J; Kikuta K; Fujishima K; Yachie N; Tomita M; Kanai A
    Mol Biol Evol; 2008 Dec; 25(12):2709-16. PubMed ID: 18832079
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Analysis of tRNA abstract shapes of precursor/derivative amino acids in Archaea.
    Burbano HA; Andrade E
    Gene; 2007 Jul; 396(1):75-83. PubMed ID: 17433860
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Transfer RNA paralogs: evidence for genetic code-amino acid biosynthesis coevolution and an archaeal root of life.
    Xue H; Tong KL; Marck C; Grosjean H; Wong JT
    Gene; 2003 May; 310():59-66. PubMed ID: 12801633
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Nucleotide triplet based molecular phylogeny of class I and class II aminoacyl t-RNA synthetase in three domain of life process: bacteria, archaea, and eukarya.
    Mondal UK; Das B; Ghosh TC; Sen A; Bothra AK
    J Biomol Struct Dyn; 2008 Dec; 26(3):321-8. PubMed ID: 18808198
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Building a tRNA thermometer to estimate microbial adaptation to temperature.
    Cimen E; Jensen SE; Buckler ES
    Nucleic Acids Res; 2020 Dec; 48(21):12004-12015. PubMed ID: 33196821
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Tri-split tRNA is a transfer RNA made from 3 transcripts that provides insight into the evolution of fragmented tRNAs in archaea.
    Fujishima K; Sugahara J; Kikuta K; Hirano R; Sato A; Tomita M; Kanai A
    Proc Natl Acad Sci U S A; 2009 Feb; 106(8):2683-7. PubMed ID: 19190180
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Analysis of tRNA gene sequences by neural network.
    Sun J; Song WY; Zhu LH; Chen RS
    J Comput Biol; 1995; 2(3):409-16. PubMed ID: 8521271
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Discovery of permuted and recently split transfer RNAs in Archaea.
    Chan PP; Cozen AE; Lowe TM
    Genome Biol; 2011; 12(4):R38. PubMed ID: 21489296
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Experimental confirmation of a whole set of tRNA molecules in two archaeal species.
    Watanabe Y; Kawarabayasi Y
    Int J Mol Sci; 2015 Jan; 16(1):2187-203. PubMed ID: 25608653
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Evolutionary patterns in the sequence and structure of transfer RNA: early origins of archaea and viruses.
    Sun FJ; Caetano-Anollés G
    PLoS Comput Biol; 2008 Mar; 4(3):e1000018. PubMed ID: 18369418
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Permuted tRNA genes in the nuclear and nucleomorph genomes of photosynthetic eukaryotes.
    Maruyama S; Sugahara J; Kanai A; Nozaki H
    Mol Biol Evol; 2010 May; 27(5):1070-6. PubMed ID: 20022888
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Adaptation to environmental temperature is a major determinant of molecular evolutionary rates in archaea.
    Groussin M; Gouy M
    Mol Biol Evol; 2011 Sep; 28(9):2661-74. PubMed ID: 21498602
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Evolution of the first genetic cells and the universal genetic code: a hypothesis based on macromolecular coevolution of RNA and proteins.
    Rouch DA
    J Theor Biol; 2014 Sep; 357():220-44. PubMed ID: 24931677
    [TBL] [Abstract][Full Text] [Related]  

  • 17. SPLITS: a new program for predicting split and intron-containing tRNA genes at the genome level.
    Sugahara J; Yachie N; Sekine Y; Soma A; Matsui M; Tomita M; Kanai A
    In Silico Biol; 2006; 6(5):411-8. PubMed ID: 17274770
    [TBL] [Abstract][Full Text] [Related]  

  • 18. [Structural features of archaebacteria tRNAs and tRNA genes].
    Kuchino Y
    Tanpakushitsu Kakusan Koso; 1985 Oct; 30(11):1207-28. PubMed ID: 3936116
    [No Abstract]   [Full Text] [Related]  

  • 19. A polyphyletic model for the origin of tRNAs has more support than a monophyletic model.
    Di Giulio M
    J Theor Biol; 2013 Feb; 318():124-8. PubMed ID: 23174278
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Archetypical features in tRNA families.
    Nicoghosian K; Bigras M; Sankoff D; Cedergren R
    J Mol Evol; 1987; 26(4):341-6. PubMed ID: 3131535
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.